RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 PLA2G6O60733 806 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 MCM3P25205 808 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 HIRAP54198 1017 aaPredicted RBP13.3□□□□□ -0.28
PDE6B-212ENST00000496514 PRKCEQ02156 737 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 TTMPQ5BVD1 217 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 TREML2Q5T2D2 321 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 PLCD4Q9BRC7 762 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 TRIM7Q9C029 511 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 AMFRQ9UKV5 643 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 ZNF214Q9UL59 606 aaPredicted RBP13.3□□□□□ -0.28
PDE6B-212ENST00000496514 PCDHA10Q9Y5I2 948 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 EPHB4P54760 987 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 MAP3K10Q02779 954 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
PDE6B-212ENST00000496514 PASD1Q8IV76 773 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 IFT20Q8IY31 132 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 EXOC4Q96A65 974 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 MKNK1Q9BUB5 465 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 MOV10L1Q9BXT6 1211 aaKnown RBP13.3□□□□□ -0.28
PDE6B-212ENST00000496514 FER1L6Q2WGJ9 1857 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 BCRP11274 1271 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 INTS8Q75QN2 995 aaKnown RBP13.3□□□□□ -0.28
PDE6B-212ENST00000496514 VSIG10LQ86VR7 867 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 XPNPEP1Q9NQW7 623 aa13.3□□□□□ -0.28
PDE6B-212ENST00000496514 PGRMC1O00264 195 aaKnown RBP13.29□□□□□ -0.28
PDE6B-212ENST00000496514 CCND2P30279 289 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 ZNF280AP59817 542 aaPredicted RBP13.29□□□□□ -0.28
PDE6B-212ENST00000496514 ACTR2P61160 394 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 FAM212AQ96EL1 285 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 POLR3FQ9H1D9 316 aaPredicted RBP13.29□□□□□ -0.28
PDE6B-212ENST00000496514 TMEM206Q9H813 350 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 TSKSQ9UJT2 592 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 TCRBV7S2A1N4TA0A589 114 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 IRF6O14896 467 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 HSF2BPO75031 334 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
PDE6B-212ENST00000496514 GJC1P36383 396 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 TNNC1P63316 161 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 EGFL6Q8IUX8 553 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 ANKRD35Q8N283 1001 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 FAM118BQ9BPY3 351 aa13.29□□□□□ -0.28
PDE6B-212ENST00000496514 JPH1Q9HDC5 661 aaPredicted RBP13.29□□□□□ -0.28
PDE6B-212ENST00000496514 GTPBP10A4D1E9 387 aaKnown RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 SMIM23A6NLE4 172 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 TUBBP07437 444 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 KCNA2P16389 499 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 LMNB1P20700 586 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 GTF2BQ00403 316 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 DRP2Q13474 957 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 PPP2R5AQ15172 486 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 CFAP58Q5T655 872 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 LEKR1Q6ZMV7 388 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 C4orf19Q8IY42 314 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 RFFLQ8WZ73 363 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 CYP39A1Q9NYL5 469 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 ATAD5Q96QE3 1844 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 ADM5C9JUS6 153 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 ZEB2O60315 1214 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 GJB6O95452 261 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 SMTNP53814 917 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 PDCLQ13371 301 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 TMEM63BQ5T3F8 832 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 UBAP2Q5T6F2 1119 aaKnown RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 UBLCP1Q8WVY7 318 aaPredicted RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 RNPC3Q96LT9 517 aaKnown RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 MED4Q9NPJ6 270 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 KCND2Q9NZV8 630 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 NENFQ9UMX5 172 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 PTPN22Q9Y2R2 807 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 ALG6Q9Y672 507 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 DDNO94850 711 aaPredicted RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 CFHP08603 1231 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 CHRNB2P17787 502 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 TNNI1P19237 187 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 CETN1Q12798 172 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 BIRC3Q13489 604 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 LRRC31Q6UY01 552 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 ZNF572Q7Z3I7 529 aaPredicted RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 FAM76AQ8TAV0 307 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 NSUN6Q8TEA1 469 aaKnown RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 MYCBPQ99417 103 aaPredicted RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 FAM107BQ9H098 131 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 GDF3Q9NR23 364 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 SLC9A2Q9UBY0 812 aa13.28□□□□□ -0.28
PDE6B-212ENST00000496514 DBR1Q9UK59 544 aaKnown RBP13.28□□□□□ -0.28
PDE6B-212ENST00000496514 ZNF233A6NK53 670 aa13.27□□□□□ -0.28
PDE6B-212ENST00000496514 SPDYE16A6NNV3 312 aaPredicted RBP13.27□□□□□ -0.28
PDE6B-212ENST00000496514 PGK2P07205 417 aa13.27□□□□□ -0.28
PDE6B-212ENST00000496514 DSG3P32926 999 aa13.27□□□□□ -0.28
PDE6B-212ENST00000496514 ACTN2P35609 894 aa13.27□□□□□ -0.28
PDE6B-212ENST00000496514 KCNJ1P48048 391 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms