RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 A1CFQ9NQ94 594 aaKnown RBP5.5□□□□□ -1.53
XPA-204ENST00000496104 HOMER2Q9NSB8 354 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 GTF2IRD1Q9UHL9 959 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 SERPINB13Q9UIV8 391 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 GMEB2Q9UKD1 530 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 KLK13Q9UKR3 277 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 FBXL21Q9UKT6 434 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 ATXN7L1Q9ULK2 861 aaPredicted RBP5.5□□□□□ -1.53
XPA-204ENST00000496104 ZNF232Q9UNY5 417 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 ARID1BQ8NFD5 2236 aaPredicted RBP5.5□□□□□ -1.53
XPA-204ENST00000496104 CPNE3O75131 537 aaKnown RBP5.49□□□□□ -1.53
XPA-204ENST00000496104 TNFRSF21O75509 655 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 DGKIO75912 1065 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 ARIH2O95376 493 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 SSBP05455 408 aaKnown RBP eCLIP5.49□□□□□ -1.53
XPA-204ENST00000496104 FGFR3P22607 806 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 HOXC13P31276 330 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 GATMP50440 423 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 AMPD3Q01432 767 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 POU5F1BQ06416 359 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 APOBRQ0VD83 1088 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 FOXD4Q12950 439 aaPredicted RBP5.49□□□□□ -1.53
XPA-204ENST00000496104 LAIR1Q6GTX8 287 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 KIAA1841Q6NSI8 718 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 HOMER1Q86YM7 354 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 SAMD3Q8N6K7 520 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 C12orf76Q8N812 135 aaPredicted RBP5.49□□□□□ -1.53
XPA-204ENST00000496104 SPATA18Q8TC71 538 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 EPS8L3Q8TE67 593 aaKnown RBP5.49□□□□□ -1.53
XPA-204ENST00000496104 RHBDD1Q8TEB9 315 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 APPBP2Q92624 585 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 TSR2Q969E8 191 aaKnown RBP5.49□□□□□ -1.53
XPA-204ENST00000496104 CCDC74AQ96AQ1 378 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 ABHD17AQ96GS6 310 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 PKNOX2Q96KN3 472 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 ZSCAN10Q96SZ4 725 aaPredicted RBP5.49□□□□□ -1.53
XPA-204ENST00000496104 DDX23Q9BUQ8 820 aaKnown RBP5.49□□□□□ -1.53
XPA-204ENST00000496104 RAVER2Q9HCJ3 691 aaKnown RBP5.49□□□□□ -1.53
XPA-204ENST00000496104 CYP26B1Q9NR63 512 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 HDAC6Q9UBN7 1215 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 SRPK3Q9UPE1 567 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 SIT1Q9Y3P8 196 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 RWDD3Q9Y3V2 267 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 PCDHGB7Q9Y5F8 929 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 KCNMB2Q9Y691 235 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 SDK1Q7Z5N4 2213 aa5.49□□□□□ -1.53
XPA-204ENST00000496104 SHROOM3Q8TF72 1996 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 CCDC189A1A4V9 331 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 TGFBR3LH3BV60 316 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 J3QKU1 62 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 HAS3O00219 553 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 KRT18P05783 430 aaKnown RBP5.48□□□□□ -1.53
XPA-204ENST00000496104 HLA-DOAP06340 250 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 ARAFP10398 606 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 AKR1B1P15121 316 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 HOXB8P17481 243 aaPredicted RBP5.48□□□□□ -1.53
XPA-204ENST00000496104 EIF4BP23588 611 aaKnown RBP5.48□□□□□ -1.53
XPA-204ENST00000496104 MAN1A1P33908 653 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 CPT1AP50416 773 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 SRSF5Q13243 272 aaKnown RBP5.48□□□□□ -1.53
XPA-204ENST00000496104 FZD5Q13467 585 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 BRD3Q15059 726 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 PPP2R5AQ15172 486 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 C4orf17Q53FE4 359 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 STPG1Q5TH74 334 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 MEI1Q5TIA1 1274 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 IER5Q5VY09 327 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 IL31Q6EBC2 164 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 KIAA1211LQ6NV74 962 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 PCSK4Q6UW60 755 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 KIAA1211Q6ZU35 1233 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 PCGF5Q86SE9 256 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 OR6J1Q8NGC5 347 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 ATRIPQ8WXE1 791 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 SECISBP2LQ93073 1101 aaKnown RBP5.48□□□□□ -1.53
XPA-204ENST00000496104 PPP2R3CQ969Q6 453 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 GPRASP2Q96D09 838 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 BORCS6Q96GS4 357 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 LRIG1Q96JA1 1093 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 SEC16BQ96JE7 1060 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 SUSD3Q96L08 255 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 CDCA3Q99618 268 aaPredicted RBP5.48□□□□□ -1.53
XPA-204ENST00000496104 WDR11Q9BZH6 1224 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 C12orf49Q9H741 205 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 VTA1Q9NP79 307 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 ARHGEF3Q9NR81 526 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 FOXD3Q9UJU5 478 aaPredicted RBP5.48□□□□□ -1.53
XPA-204ENST00000496104 ANAPC4Q9UJX5 808 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 HCFC2Q9Y5Z7 792 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 MYH7BA7E2Y1 1941 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 LAMA4Q16363 1823 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 COL6A6A6NMZ7 2263 aa5.48□□□□□ -1.53
XPA-204ENST00000496104 FNDC1Q4ZHG4 1894 aaPredicted RBP5.47□□□□□ -1.53
XPA-204ENST00000496104 ANP32CO43423 234 aa5.47□□□□□ -1.53
XPA-204ENST00000496104 RPLP1P05386 114 aaKnown RBP5.47□□□□□ -1.53
XPA-204ENST00000496104 LDHCP07864 332 aa5.47□□□□□ -1.53
XPA-204ENST00000496104 CALRP27797 417 aaKnown RBP5.47□□□□□ -1.53
XPA-204ENST00000496104 HOXC8P31273 242 aa5.47□□□□□ -1.53
XPA-204ENST00000496104 ST13P50502 369 aaKnown RBP5.47□□□□□ -1.53
XPA-204ENST00000496104 STARD6P59095 220 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms