RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PADI6Q6TGC4 694 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 TMEM173Q86WV6 379 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-214ENST00000496043 RNF135Q8IUD6 432 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 ZBTB8OSQ8IWT0 167 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 SUSD6Q92537 303 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 RAB34Q9BZG1 259 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 ZBP1Q9H171 429 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 C11orf16Q9NQ32 467 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 GIT1Q9Y2X7 761 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 IRAK3Q9Y616 596 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 MUC3AQ02505 3323 aa14.12□□□□□ -0.15
PTPRF-214ENST00000496043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-214ENST00000496043 ARL5CA6NH57 179 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 PRR33A8MZF0 331 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 LOC730098B7Z3J9 87 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 NR1I2O75469 434 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 TOB1P50616 345 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-214ENST00000496043 NBR1Q14596 966 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 SLC27A1Q6PCB7 646 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 POTEGQ6S5H5 508 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 BCL7CQ8WUZ0 217 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-214ENST00000496043 AUTS2Q8WXX7 1259 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 RPGRIP1Q96KN7 1286 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 PRIMPOLQ96LW4 560 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 GAD1Q99259 594 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 C2orf40Q9H1Z8 148 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 FZD8Q9H461 694 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 PRMT7Q9NVM4 692 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-214ENST00000496043 MIOSQ9NXC5 875 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 RAPGEFL1Q9UHV5 662 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 KIAA1024Q9UPX6 916 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 HES2Q9Y543 173 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 PCDHB6Q9Y5E3 794 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 HCFC2Q9Y5Z7 792 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 ATG2AQ2TAZ0 1938 aa14.11□□□□□ -0.15
PTPRF-214ENST00000496043 LAD1O00515 517 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 INPPL1O15357 1258 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 B4GALT5O43286 388 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 B4GALT3O60512 393 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 NPTXRO95502 500 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 OR1G1P47890 313 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 MCM2P49736 904 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 ITIH3Q06033 890 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 CBX2Q14781 532 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-214ENST00000496043 PPP2R5AQ15172 486 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 ECM1Q16610 540 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 FAM187BQ17R55 369 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 HERC4Q5GLZ8 1057 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-214ENST00000496043 MCTP1Q6DN14 999 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 CES5AQ6NT32 575 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 DTHD1Q6ZMT9 781 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 PPFIBP1Q86W92 1011 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 COLGALT2Q8IYK4 626 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 TMX3Q96JJ7 454 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 COLEC11Q9BWP8 271 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 APOL6Q9BWW8 343 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 APOL5Q9BWW9 433 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 ADAM7Q9H2U9 754 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 DAXXQ9UER7 740 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-214ENST00000496043 PARP2Q9UGN5 583 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 DNM3Q9UQ16 869 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 SSX2IPQ9Y2D8 614 aa14.1□□□□□ -0.15
PTPRF-214ENST00000496043 AKAP5P24588 427 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 MLH1P40692 756 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 PRPHP41219 470 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 NAMPTP43490 491 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 MAPK6Q16659 721 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 TMEM132AQ24JP5 1023 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 KRT79Q5XKE5 535 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 CDCA2Q69YH5 1023 aaPredicted RBP14.09□□□□□ -0.15
PTPRF-214ENST00000496043 CDR2LQ86X02 465 aaPredicted RBP14.09□□□□□ -0.15
PTPRF-214ENST00000496043 IGSF22Q8N9C0 903 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 DEPTORQ8TB45 409 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 SNX29Q8TEQ0 813 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 IFT74Q96LB3 600 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 EMILIN2Q9BXX0 1053 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 BHMT2Q9H2M3 363 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 MRPL17Q9NRX2 175 aaKnown RBP14.09□□□□□ -0.15
PTPRF-214ENST00000496043 MUTYHQ9UIF7 546 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 HCN4Q9Y3Q4 1203 aa14.09□□□□□ -0.15
PTPRF-214ENST00000496043 ARIH1Q9Y4X5 557 aaPredicted RBP14.09□□□□□ -0.15
PTPRF-214ENST00000496043 H3BQV1 296 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 ACKR2O00590 384 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 N4BP3O15049 544 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 SOD2P04179 222 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 SSBP05455 408 aaKnown RBP eCLIP14.08□□□□□ -0.16
PTPRF-214ENST00000496043 KLRC2P26717 231 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 GJB2P29033 226 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 SCNN1GP51170 649 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 DSC1Q08554 894 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 PRPF4BQ13523 1007 aaKnown RBP14.08□□□□□ -0.16
PTPRF-214ENST00000496043 PTPN14Q15678 1187 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 RILPL1Q5EBL4 403 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 ATAT1Q5SQI0 421 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 SLC22A17Q8WUG5 538 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 EDAQ92838 391 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 KIFAP3Q92845 792 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 RIPOR3Q96MK2 946 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms