RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 SLC22A17Q8WUG5 538 aa20.49■□□□□ 0.87
CHD1L-209ENST00000492728 EDAQ92838 391 aa20.49■□□□□ 0.87
CHD1L-209ENST00000492728 CCDC51Q96ER9 411 aa20.49■□□□□ 0.87
CHD1L-209ENST00000492728 CCDC43Q96MW1 224 aaKnown RBP20.49■□□□□ 0.87
CHD1L-209ENST00000492728 APOL6Q9BWW8 343 aa20.49■□□□□ 0.87
CHD1L-209ENST00000492728 NFKBIZQ9BYH8 718 aa20.49■□□□□ 0.87
CHD1L-209ENST00000492728 POMKQ9H5K3 350 aa20.49■□□□□ 0.87
CHD1L-209ENST00000492728 TUFT1Q9NNX1 390 aa20.49■□□□□ 0.87
CHD1L-209ENST00000492728 ZNF318Q5VUA4 2279 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 ARL5CA6NH57 179 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 NRP1O14786 923 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 SSBP05455 408 aaKnown RBP eCLIP20.48■□□□□ 0.87
CHD1L-209ENST00000492728 HOXB8P17481 243 aaPredicted RBP20.48■□□□□ 0.87
CHD1L-209ENST00000492728 AXLP30530 894 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 SCNN1GP51170 649 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 DSC1Q08554 894 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 PCBP1Q15365 356 aaKnown RBP eCLIP20.48■□□□□ 0.87
CHD1L-209ENST00000492728 NOSTRINQ8IVI9 506 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 COLGALT2Q8IYK4 626 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 GSTCDQ8NEC7 633 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 TMEM175Q9BSA9 504 aa20.48■□□□□ 0.87
CHD1L-209ENST00000492728 POLR3CQ9BUI4 534 aaPredicted RBP20.48■□□□□ 0.87
CHD1L-209ENST00000492728 DBR1Q9UK59 544 aaKnown RBP20.48■□□□□ 0.87
CHD1L-209ENST00000492728 PRG3Q9Y2Y8 225 aaPredicted RBP20.48■□□□□ 0.87
CHD1L-209ENST00000492728 ARIH1Q9Y4X5 557 aaPredicted RBP20.48■□□□□ 0.87
CHD1L-209ENST00000492728 LILRB3O75022 631 aa20.47■□□□□ 0.87
CHD1L-209ENST00000492728 EFEMP2O95967 443 aa20.47■□□□□ 0.87
CHD1L-209ENST00000492728 EDN1P05305 212 aa20.47■□□□□ 0.87
CHD1L-209ENST00000492728 XRCC6P12956 609 aaKnown RBP eCLIP20.47■□□□□ 0.87
CHD1L-209ENST00000492728 HMGN5P82970 282 aaKnown RBP20.47■□□□□ 0.87
CHD1L-209ENST00000492728 CDCA2Q69YH5 1023 aaPredicted RBP20.47■□□□□ 0.87
CHD1L-209ENST00000492728 TAS1R1Q7RTX1 841 aa20.47■□□□□ 0.87
CHD1L-209ENST00000492728 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
CHD1L-209ENST00000492728 ADAM7Q9H2U9 754 aa20.47■□□□□ 0.87
CHD1L-209ENST00000492728 SH2B1Q9NRF2 756 aaPredicted RBP20.47■□□□□ 0.87
CHD1L-209ENST00000492728 USP20Q9Y2K6 914 aa20.47■□□□□ 0.87
CHD1L-209ENST00000492728 LRRIQ4A6NIV6 560 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 NPTXRO95502 500 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 AKAP5P24588 427 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 RPA1P27694 616 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 TOB1P50616 345 aaPredicted RBP20.46■□□□□ 0.87
CHD1L-209ENST00000492728 ZXDAP98168 799 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 ORC2Q13416 577 aaPredicted RBP20.46■□□□□ 0.87
CHD1L-209ENST00000492728 TPRNQ4KMQ1 711 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 RARS2Q5T160 578 aaKnown RBP20.46■□□□□ 0.87
CHD1L-209ENST00000492728 RNF168Q8IYW5 571 aaPredicted RBP20.46■□□□□ 0.87
CHD1L-209ENST00000492728 CNNM3Q8NE01 707 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 KANSL3Q9P2N6 904 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 FAN1Q9Y2M0 1017 aa20.46■□□□□ 0.87
CHD1L-209ENST00000492728 A0A1B0GUA9 196 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 CARNS1A5YM72 827 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 CNPP09543 421 aaKnown RBP20.45■□□□□ 0.86
CHD1L-209ENST00000492728 RBM25P49756 843 aaKnown RBP20.45■□□□□ 0.86
CHD1L-209ENST00000492728 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 TRIM67Q6ZTA4 783 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 KLHL5Q96PQ7 755 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 FAM193BQ96PV7 902 aaPredicted RBP20.45■□□□□ 0.86
CHD1L-209ENST00000492728 NACC1Q96RE7 527 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 HERC2P3Q9BVR0 1158 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 POLD4Q9HCU8 107 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 CACNG4Q9UBN1 327 aa20.45■□□□□ 0.86
CHD1L-209ENST00000492728 C2CD4DB7Z1M9 353 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 ALDH2P05091 517 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
CHD1L-209ENST00000492728 U2AF2P26368 475 aaKnown RBP eCLIP20.44■□□□□ 0.868e-8■■□□□ 12.3
CHD1L-209ENST00000492728 OR1G1P47890 313 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 CLCN4P51793 760 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 SLC27A1Q6PCB7 646 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 PADI6Q6TGC4 694 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 FAM184AQ8NB25 1140 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 MCPH1Q8NEM0 835 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 KIFC3Q9BVG8 833 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 CXCL16Q9H2A7 254 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 FZD8Q9H461 694 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 UBN1Q9NPG3 1134 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 DZANK1Q9NVP4 752 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 KLK14Q9P0G3 267 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 PCDHB6Q9Y5E3 794 aa20.44■□□□□ 0.86
CHD1L-209ENST00000492728 DENND4AQ7Z401 1863 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 TMEM221A6NGB7 291 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 M0R296 226 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 CD2BP2O95400 341 aaKnown RBP20.43■□□□□ 0.86
CHD1L-209ENST00000492728 SOD2P04179 222 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 CYP11B2P19099 503 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 TRAPPC10P48553 1259 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 FXR2P51116 673 aaKnown RBP eCLIP20.43■□□□□ 0.864e-7■□□□□ 8.9
CHD1L-209ENST00000492728 ITIH3Q06033 890 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 GIT2Q14161 759 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 BMS1Q14692 1282 aaKnown RBP20.43■□□□□ 0.86
CHD1L-209ENST00000492728 IL17AQ16552 155 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 PTPN21Q16825 1174 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 RABGGTAQ92696 567 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 TRIM6Q9C030 488 aaPredicted RBP20.43■□□□□ 0.86
CHD1L-209ENST00000492728 CCDC113Q9H0I3 377 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 PDZD7Q9H5P4 517 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 GIT1Q9Y2X7 761 aa20.43■□□□□ 0.86
CHD1L-209ENST00000492728 ARHGEF35A5YM69 484 aa20.42■□□□□ 0.86
CHD1L-209ENST00000492728 PP2D1A8MPX8 630 aa20.42■□□□□ 0.86
CHD1L-209ENST00000492728 C2CD2LO14523 706 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms