RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TTC3P53804 2025 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 B4GALT5O43286 388 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 HOXA2O43364 376 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 TOM1L1O75674 476 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 GJB5O95377 273 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 PROZP22891 400 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 NMT1P30419 496 aaKnown RBP17.38■□□□□ 0.37
TRA2A-208ENST00000490942 SNRPFP62306 86 aaKnown RBP17.38■□□□□ 0.37
TRA2A-208ENST00000490942 BMT2Q1RMZ1 405 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 DCAF4L1Q3SXM0 396 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
TRA2A-208ENST00000490942 NT5DC1Q5TFE4 455 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 ATF7IP2Q5U623 682 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.38■□□□□ 0.372e-7■■■■■ 30.1
TRA2A-208ENST00000490942 EPM2AIP1Q7L775 607 aaPredicted RBP17.38■□□□□ 0.37
TRA2A-208ENST00000490942 MRPL10Q7Z7H8 261 aaKnown RBP17.38■□□□□ 0.37
TRA2A-208ENST00000490942 HERC6Q8IVU3 1022 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 HACE1Q8IYU2 909 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 PGBD4Q96DM1 585 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 ACO2Q99798 780 aaKnown RBP17.38■□□□□ 0.37
TRA2A-208ENST00000490942 ADPGKQ9BRR6 497 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 EXOC1Q9NV70 894 aa17.38■□□□□ 0.37
TRA2A-208ENST00000490942 KIF20AO95235 890 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 GCNT3O95395 438 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 CASP1P29466 404 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 MCM4P33991 863 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 SMAD3P84022 425 aaKnown RBP17.37■□□□□ 0.37
TRA2A-208ENST00000490942 KMT5BQ4FZB7 885 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 UBXN11Q5T124 520 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 ZNF598Q86UK7 904 aaKnown RBP17.37■□□□□ 0.37
TRA2A-208ENST00000490942 ECHDC2Q86YB7 292 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 MYOCDQ8IZQ8 938 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 ZNF507Q8TCN5 953 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 ACCSQ96QU6 501 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 PDZD7Q9H5P4 517 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 UBN1Q9NPG3 1134 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 PCDHB7Q9Y5E2 793 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 PCDHB2Q9Y5E7 798 aa17.37■□□□□ 0.37
TRA2A-208ENST00000490942 COL4A6Q14031 1691 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 HNRNPDLO14979 420 aaKnown RBP17.36■□□□□ 0.37
TRA2A-208ENST00000490942 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 MCF2P10911 925 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 DEFB103AP81534 67 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 HTRA4P83105 476 aaPredicted RBP17.36■□□□□ 0.37
TRA2A-208ENST00000490942 KYAT1Q16773 422 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 SLFN12LQ6IEE8 588 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 MPZL3Q6UWV2 235 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 SMARCE1Q969G3 411 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 TARS2Q9BW92 718 aaKnown RBP17.36■□□□□ 0.37
TRA2A-208ENST00000490942 TRIM6Q9C030 488 aaPredicted RBP17.36■□□□□ 0.37
TRA2A-208ENST00000490942 CGNQ9P2M7 1197 aaKnown RBP17.36■□□□□ 0.37
TRA2A-208ENST00000490942 STYXL1Q9Y6J8 313 aa17.36■□□□□ 0.37
TRA2A-208ENST00000490942 ABLIM1O14639 778 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 DGKIO75912 1065 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 EDN1P05305 212 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 LIG4P49917 911 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 POU5F1Q01860 360 aaKnown RBP17.35■□□□□ 0.37
TRA2A-208ENST00000490942 MCL1Q07820 350 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 PNOCQ13519 176 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 RAB30Q15771 203 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 TMEM132AQ24JP5 1023 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 ZC2HC1CQ53FD0 456 aaPredicted RBP17.35■□□□□ 0.37
TRA2A-208ENST00000490942 COBLL1Q53SF7 1204 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 CPB2Q96IY4 423 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 RAD9AQ99638 391 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 CLSTN2Q9H4D0 955 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 RC3H2Q9HBD1 1191 aaKnown RBP17.35■□□□□ 0.37
TRA2A-208ENST00000490942 TBC1D7Q9P0N9 293 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 LRFN2Q9ULH4 789 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 INSL6Q9Y581 213 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 PCDHA5Q9Y5H7 936 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 PCDHA11Q9Y5I1 949 aa17.35■□□□□ 0.37
TRA2A-208ENST00000490942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.34■□□□□ 0.37
TRA2A-208ENST00000490942 TTLL13PA6NNM8 815 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 KIAA0391O15091 583 aaKnown RBP17.34■□□□□ 0.37
TRA2A-208ENST00000490942 INPPL1O15357 1258 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 CLDN3O15551 220 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 MYBP10242 640 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 ATF7P17544 494 aaPredicted RBP17.34■□□□□ 0.37
TRA2A-208ENST00000490942 PPP1R2P41236 205 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 CASP5P51878 434 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 STK4Q13043 487 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 TRIML1Q8N9V2 468 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 SP7Q8TDD2 431 aaPredicted RBP17.34■□□□□ 0.37
TRA2A-208ENST00000490942 TMEM174Q8WUU8 243 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 SCFD1Q8WVM8 642 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 ZNF689Q96CS4 500 aaPredicted RBP17.34■□□□□ 0.37
TRA2A-208ENST00000490942 BICD1Q96G01 975 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 IPPQ9Y573 584 aa17.34■□□□□ 0.37
TRA2A-208ENST00000490942 HSP90AA2PQ14568 343 aaPredicted RBP17.33■□□□□ 0.36
TRA2A-208ENST00000490942 NOLC1Q14978 699 aaKnown RBP eCLIP17.33■□□□□ 0.36
TRA2A-208ENST00000490942 ZNF568Q3ZCX4 644 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 EEF1DP3Q658K8 133 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 CMTR2Q8IYT2 770 aaKnown RBP17.33■□□□□ 0.36
TRA2A-208ENST00000490942 GUF1Q8N442 669 aaKnown RBP17.33■□□□□ 0.36
TRA2A-208ENST00000490942 KIAA0895Q8NCT3 520 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 SMG8Q8ND04 991 aaKnown RBP17.33■□□□□ 0.36
TRA2A-208ENST00000490942 GOLGA5Q8TBA6 731 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 TCHPQ9BT92 498 aa17.33■□□□□ 0.36
TRA2A-208ENST00000490942 EIF2AQ9BY44 585 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms