RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 MAP4K3Q8IVH8 894 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 KIAA0895Q8NCT3 520 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 SMARCE1Q969G3 411 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 CCDC47Q96A33 483 aaKnown RBP18.37■□□□□ 0.53
SFXN5-220ENST00000490056 BICD1Q96G01 975 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 C1orf112Q9NSG2 853 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 TNFSF13BQ9Y275 285 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 TTC3P53804 2025 aa18.37■□□□□ 0.53
SFXN5-220ENST00000490056 TISP43B9A030 160 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 ATP2A2P16615 1042 aaKnown RBP18.36■□□□□ 0.53
SFXN5-220ENST00000490056 HOXD13P35453 343 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 PSMD2Q13200 908 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 KCNB1Q14721 858 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 ISM2Q6H9L7 571 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 SLC27A1Q6PCB7 646 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 EPM2AIP1Q7L775 607 aaPredicted RBP18.36■□□□□ 0.53
SFXN5-220ENST00000490056 RNF169Q8NCN4 708 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 SPATA20Q8TB22 786 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 HVCN1Q96D96 273 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 ACCSQ96QU6 501 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 FAM105AQ9NUU6 356 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 GDAQ9Y2T3 454 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 PCDHB2Q9Y5E7 798 aa18.36■□□□□ 0.53
SFXN5-220ENST00000490056 A0A0U1RQF3 1178 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 ANKRD63C9JTQ0 380 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 ATF7P17544 494 aaPredicted RBP18.35■□□□□ 0.53
SFXN5-220ENST00000490056 SCP2P22307 547 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 LIG4P49917 911 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 ALCAMQ13740 583 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 SLC39A4Q6P5W5 647 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 FAM43BQ6ZT52 329 aaPredicted RBP18.35■□□□□ 0.53
SFXN5-220ENST00000490056 ZBTB33Q86T24 672 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 NELFCDQ8IXH7 590 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 CRIPAKQ8N1N5 446 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 SMG8Q8ND04 991 aaKnown RBP18.35■□□□□ 0.53
SFXN5-220ENST00000490056 SCFD1Q8WVM8 642 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 LPPQ93052 612 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 TOP1MTQ969P6 601 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 CCDC51Q96ER9 411 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 GSDMAQ96QA5 445 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 TRAIPQ9BWF2 469 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 HAPLN2Q9GZV7 340 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 PTPRHQ9HD43 1115 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 HES2Q9Y543 173 aa18.35■□□□□ 0.53
SFXN5-220ENST00000490056 MEIS3P2A8K0S8 358 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 BIN1O00499 593 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 ABLIM1O14639 778 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 HNRNPDLO14979 420 aaKnown RBP18.34■□□□□ 0.53
SFXN5-220ENST00000490056 EIF3DO15371 548 aaKnown RBP eCLIP18.34■□□□□ 0.53
SFXN5-220ENST00000490056 MBD3O95983 291 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 PIGRP01833 764 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 HARSP12081 509 aaKnown RBP18.34■□□□□ 0.53
SFXN5-220ENST00000490056 PROZP22891 400 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 ABCD1P33897 745 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 GATMP50440 423 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 RABGGTBP53611 331 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 ZPBP2Q6X784 338 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 STXBP4Q6ZWJ1 553 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 ZNF598Q86UK7 904 aaKnown RBP18.34■□□□□ 0.53
SFXN5-220ENST00000490056 NPAS4Q8IUM7 802 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 HERC6Q8IVU3 1022 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 SMYD4Q8IYR2 804 aaPredicted RBP18.34■□□□□ 0.53
SFXN5-220ENST00000490056 SYCP3Q8IZU3 236 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 ZNF507Q8TCN5 953 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 SLC9A7Q96T83 725 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 ADPGKQ9BRR6 497 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 TCHPQ9BT92 498 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 NUP62CLQ9H1M0 184 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 CDT1Q9H211 546 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 ANKFY1Q9P2R3 1169 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 MAN1B1Q9UKM7 699 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 LRFN2Q9ULH4 789 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 IPPQ9Y573 584 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 PCDHB7Q9Y5E2 793 aa18.34■□□□□ 0.53
SFXN5-220ENST00000490056 ZNF623O75123 536 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 TOM1L1O75674 476 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 STAG3L1P0CL83 205 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 FGFR1P11362 822 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 MATR3P43243 847 aaKnown RBP eCLIP18.33■□□□□ 0.52
SFXN5-220ENST00000490056 RAB27AP51159 221 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 ZNF568Q3ZCX4 644 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 MPZL3Q6UWV2 235 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 MRPL10Q7Z7H8 261 aaKnown RBP18.33■□□□□ 0.52
SFXN5-220ENST00000490056 PHOSPHO2Q8TCD6 241 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 ZBED2Q9BTP6 218 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 APOL6Q9BWW8 343 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 TRIM6Q9C030 488 aaPredicted RBP18.33■□□□□ 0.52
SFXN5-220ENST00000490056 NXF3Q9H4D5 531 aaKnown RBP18.33■□□□□ 0.52
SFXN5-220ENST00000490056 RNF19AQ9NV58 838 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 RMND1Q9NWS8 449 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 TMEM161AQ9NX61 479 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 KIAA1468Q9P260 1216 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 EXOC7Q9UPT5 735 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 MAPK8IP1Q9UQF2 711 aa18.33■□□□□ 0.52
SFXN5-220ENST00000490056 ZMYM2Q9UBW7 1377 aa18.32■□□□□ 0.52
SFXN5-220ENST00000490056 SKIP12755 728 aa18.32■□□□□ 0.52
SFXN5-220ENST00000490056 CEP120Q8N960 986 aa18.32■□□□□ 0.52
SFXN5-220ENST00000490056 ELAC1Q9H777 363 aaKnown RBP18.32■□□□□ 0.52
SFXN5-220ENST00000490056 TRIOBPQ9H2D6 2365 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms