RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 POMKQ9H5K3 350 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TUFT1Q9NNX1 390 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 MARCH5Q9NX47 278 aa21.57■■□□□ 1.04
TNFRSF1B-202ENST00000489921 MYO10Q9HD67 2058 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ARL5CA6NH57 179 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ALDH2P05091 517 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 HOXD11P31277 338 aaPredicted RBP21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ITIH3Q06033 890 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 DSC1Q08554 894 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TPRNQ4KMQ1 711 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TAS1R1Q7RTX1 841 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 GSTCDQ8NEC7 633 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 GAD1Q99259 594 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 POLR3CQ9BUI4 534 aaPredicted RBP21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 UBN1Q9NPG3 1134 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 DBR1Q9UK59 544 aaKnown RBP21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 FAN1Q9Y2M0 1017 aa21.56■■□□□ 1.04
TNFRSF1B-202ENST00000489921 USO1O60763 962 aaKnown RBP21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 WEE2P0C1S8 567 aa21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CA8P35219 290 aa21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 GIT2Q14161 759 aa21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 SAFBQ15424 915 aaKnown RBP eCLIP21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 BMP8AQ7Z5Y6 402 aa21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CDR2LQ86X02 465 aaPredicted RBP21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ZFP42Q96MM3 310 aa21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 NXF3Q9H4D5 531 aaKnown RBP21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 DENND4AQ7Z401 1863 aa21.55■■□□□ 1.04
TNFRSF1B-202ENST00000489921 PLXNA3P51805 1871 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 A0A1B0GUA9 196 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TTLL13PA6NNM8 815 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 F8W810 466 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 RPA1P27694 616 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 MLH1P40692 756 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 BMS1Q14692 1282 aaKnown RBP21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ECM1Q16610 540 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 POTEGQ6S5H5 508 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 MAEAQ7L5Y9 396 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 RNF168Q8IYW5 571 aaPredicted RBP21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ZSCAN31Q96LW9 406 aaPredicted RBP21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 KLHL5Q96PQ7 755 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 C2orf16Q68DN1 1984 aa21.54■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TMEM221A6NGB7 291 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 M0R296 226 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CNPP09543 421 aaKnown RBP21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 OR52Z1P0C646 297 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 SP100P23497 879 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 SCNN1GP51170 649 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CLCN4P51793 760 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ORC2Q13416 577 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 NBR1Q14596 966 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 RARS2Q5T160 578 aaKnown RBP21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CDCA2Q69YH5 1023 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 NOSTRINQ8IVI9 506 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 BSNDQ8WZ55 320 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 ASIC4Q96FT7 647 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 FAM193BQ96PV7 902 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 NACC1Q96RE7 527 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 FZD8Q9H461 694 aa21.53■■□□□ 1.04
TNFRSF1B-202ENST00000489921 KMT2EQ8IZD2 1858 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 C2CD4DB7Z1M9 353 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 SSBP05455 408 aaKnown RBP eCLIP21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 AKAP5P24588 427 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TOB1P50616 345 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 NCBP1Q09161 790 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 PTPN21Q16825 1174 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 TTC38Q5R3I4 469 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CES5AQ6NT32 575 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 SLC27A1Q6PCB7 646 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 PPP4R3CPQ6ZMV5 832 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 MFSD14AQ96MC6 490 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 FBXL18Q96ME1 805 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 CCDC43Q96MW1 224 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 NECTIN4Q96NY8 510 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 DZANK1Q9NVP4 752 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 STK39Q9UEW8 545 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 GIT1Q9Y2X7 761 aa21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 PRG3Q9Y2Y8 225 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF1B-202ENST00000489921 USP34Q70CQ2 3546 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 NPTXRO95502 500 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 SOD2P04179 222 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 EDN1P05305 212 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 U2AF2P26368 475 aaKnown RBP eCLIP21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 OR1G1P47890 313 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 RBM25P49756 843 aaKnown RBP21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 HMGN5P82970 282 aaKnown RBP21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 FAM187BQ17R55 369 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 KIAA0319Q5VV43 1072 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 KIAA1841Q6NSI8 718 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 MCPH1Q8NEM0 835 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 APOL6Q9BWW8 343 aa21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 SH2B1Q9NRF2 756 aaPredicted RBP21.51■■□□□ 1.03
TNFRSF1B-202ENST00000489921 LRRIQ4A6NIV6 560 aa21.5■■□□□ 1.03
TNFRSF1B-202ENST00000489921 CYP11B2P19099 503 aa21.5■■□□□ 1.03
TNFRSF1B-202ENST00000489921 MTHFRP42898 656 aa21.5■■□□□ 1.03
TNFRSF1B-202ENST00000489921 FXR2P51116 673 aaKnown RBP eCLIP21.5■■□□□ 1.03
TNFRSF1B-202ENST00000489921 SIGLEC14Q08ET2 396 aa21.5■■□□□ 1.03
TNFRSF1B-202ENST00000489921 PADI6Q6TGC4 694 aa21.5■■□□□ 1.03
TNFRSF1B-202ENST00000489921 PPFIBP1Q86W92 1011 aa21.5■■□□□ 1.03
TNFRSF1B-202ENST00000489921 PBXIP1Q96AQ6 731 aa21.5■■□□□ 1.03
TNFRSF1B-202ENST00000489921 HERC2P3Q9BVR0 1158 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms