RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, human

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC8-206	ENST00000484330	RPUSD2	Q8IZ73	545 aa	Known RBP	4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	ANKRD35	Q8N283	1001 aa		4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	OR5M3	Q8NGP4	307 aa		4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	TSPEAR	Q8WU66	669 aa		4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	ZNF480	Q8WV37	535 aa		4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	GPHA2	Q96T91	129 aa		4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	CDC5L	Q99459	802 aa	Known RBP	4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	EPC1	Q9H2F5	836 aa		4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	RBM12	Q9NTZ6	932 aa	Known RBP	4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	SMPD4	Q9NXE4	827 aa		4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	ING3	Q9NXR8	418 aa		4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	DDX56	Q9NY93	547 aa	Known RBP	4.22	□□□□□ -1.73
ERCC8-206	ENST00000484330	AKR1B10	O60218	316 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	MFAP3L	O75121	409 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	IPO13	O94829	963 aa	Known RBP	4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	ENDOD1	O94919	500 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	SNUPN	O95149	360 aa	Known RBP	4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	PDGFRB	P09619	1106 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	VCAM1	P19320	739 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	ECHS1	P30084	290 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	CRHR1	P34998	444 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	IARS	P41252	1262 aa	Known RBP	4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	RECQL	P46063	649 aa	Predicted RBP	4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	SELENOP	P49908	381 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	PTPN21	Q16825	1174 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	FKBP15	Q5T1M5	1219 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	EFCAB2	Q5VUJ9	269 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	ZBTB46	Q86UZ6	589 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	GPR135	Q8IZ08	494 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	FUK	Q8N0W3	1084 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	CBARP	Q8N350	705 aa	Predicted RBP	4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	D2HGDH	Q8N465	521 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	DNER	Q8NFT8	737 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	RIN2	Q8WYP3	895 aa	Predicted RBP	4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	CHMP4C	Q96CF2	233 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	SMAD5	Q99717	465 aa	Known RBP	4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	ASPSCR1	Q9BZE9	553 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	PRDM12	Q9H4Q4	367 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	TLR9	Q9NR96	1032 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	CLCA2	Q9UQC9	943 aa		4.21	□□□□□ -1.74
ERCC8-206	ENST00000484330	E2F8	A0AVK6	867 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	FOXS1	O43638	330 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	RPLP2	P05387	115 aa	Known RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	OSM	P13725	252 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	INSRR	P14616	1297 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	GSPT1	P15170	499 aa	Known RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	GNAT2	P19087	354 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	MSX2	P35548	267 aa	Predicted RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	MCAM	P43121	646 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	MAGEA10	P43363	369 aa	Predicted RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	GZMK	P49863	264 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	PER3	P56645	1201 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	ADAM8	P78325	824 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	CCT2	P78371	535 aa	Known RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	DUSP8	Q13202	625 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	SGMS1	Q86VZ5	419 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	GSPT2	Q8IYD1	628 aa	Known RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330		Q8TCH9	128 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	EDA	Q92838	391 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	DVL3	Q92997	716 aa	Predicted RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	CYFIP2	Q96F07	1278 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	IL17RA	Q96F46	866 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	TMEM176A	Q96HP8	235 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	UHRF1	Q96T88	793 aa	Predicted RBP	4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	BCO1	Q9HAY6	547 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	GPRC5D	Q9NZD1	345 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	DNM3	Q9UQ16	869 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	HDAC5	Q9UQL6	1122 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	PCDHGA2	Q9Y5H1	932 aa		4.2	□□□□□ -1.74
ERCC8-206	ENST00000484330	TMEM127	O75204	238 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	HSP90B1	P14625	803 aa	Known RBP	4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	RGS19	P49795	217 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	NEK2	P51955	445 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	APBA1	Q02410	837 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	MGAT2	Q10469	447 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	EFEMP1	Q12805	493 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	FOXL1	Q12952	345 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.19	□□□□□ -1.74	4e-6	■■■■□ 19.5
ERCC8-206	ENST00000484330	ICAM4	Q14773	271 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	ACAP1	Q15027	740 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	PRKD1	Q15139	912 aa	Predicted RBP	4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	NOMO1	Q15155	1222 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	MST1L	Q2TV78	715 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	PPP4R3A	Q6IN85	833 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	ABHD15	Q6UXT9	468 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	MIGA2	Q7L4E1	593 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	FAM83A	Q86UY5	434 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	MSL3	Q8N5Y2	521 aa	Known RBP	4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	OR7D4	Q8NG98	312 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	JADE3	Q92613	823 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	MIEF2	Q96C03	454 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	ZNF512	Q96ME7	567 aa	Predicted RBP	4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	C7orf25	Q9BPX7	421 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	PDCD2L	Q9BRP1	358 aa		4.19	□□□□□ -1.74
ERCC8-206	ENST00000484330	CSRNP2	Q9H175	543 aa		4.19	□□□□□ -1.74

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