RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
ERCC8-206ENST00000484330 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
ERCC8-206ENST00000484330 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
ERCC8-206ENST00000484330 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
ERCC8-206ENST00000484330 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
ERCC8-206ENST00000484330 FOXD1Q16676 465 aa15.3■□□□□ 0.04
ERCC8-206ENST00000484330 MSH5O43196 834 aa14.62□□□□□ -0.07
ERCC8-206ENST00000484330 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
ERCC8-206ENST00000484330 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
ERCC8-206ENST00000484330 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
ERCC8-206ENST00000484330 ADRA2BP18089 450 aa13.89□□□□□ -0.19
ERCC8-206ENST00000484330 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
ERCC8-206ENST00000484330 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
ERCC8-206ENST00000484330 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
ERCC8-206ENST00000484330 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
ERCC8-206ENST00000484330 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
ERCC8-206ENST00000484330 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
ERCC8-206ENST00000484330 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
ERCC8-206ENST00000484330 POTEHQ6S545 545 aa12.18□□□□□ -0.46
ERCC8-206ENST00000484330 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
ERCC8-206ENST00000484330 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
ERCC8-206ENST00000484330 RNF216Q9NWF9 866 aaPredicted RBP12.04□□□□□ -0.48
ERCC8-206ENST00000484330 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
ERCC8-206ENST00000484330 DNAJC5BQ9UF47 199 aa11.96□□□□□ -0.49
ERCC8-206ENST00000484330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.54
ERCC8-206ENST00000484330 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
ERCC8-206ENST00000484330 DSG3P32926 999 aa11.4□□□□□ -0.58
ERCC8-206ENST00000484330 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
ERCC8-206ENST00000484330 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
ERCC8-206ENST00000484330 SPINK5Q9NQ38 1064 aaPredicted RBP11.33□□□□□ -0.6
ERCC8-206ENST00000484330 CAPN15O75808 1086 aa11.31□□□□□ -0.6
ERCC8-206ENST00000484330 KCNA4P22459 653 aa11.28□□□□□ -0.6
ERCC8-206ENST00000484330 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
ERCC8-206ENST00000484330 ABCB7O75027 752 aa11□□□□□ -0.65
ERCC8-206ENST00000484330 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
ERCC8-206ENST00000484330 ZNF219Q9P2Y4 722 aaPredicted RBP10.99□□□□□ -0.65
ERCC8-206ENST00000484330 APLP2Q06481 763 aa10.98□□□□□ -0.65
ERCC8-206ENST00000484330 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
ERCC8-206ENST00000484330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
ERCC8-206ENST00000484330 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
ERCC8-206ENST00000484330 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
ERCC8-206ENST00000484330 CHRDL2Q6WN34 429 aa10.84□□□□□ -0.67
ERCC8-206ENST00000484330 SLC4A1APQ9BWU0 796 aaKnown RBP10.83□□□□□ -0.68
ERCC8-206ENST00000484330 SAMD1Q6SPF0 538 aaPredicted RBP10.79□□□□□ -0.68
ERCC8-206ENST00000484330 POLA2Q14181 598 aa10.66□□□□□ -0.7
ERCC8-206ENST00000484330 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
ERCC8-206ENST00000484330 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
ERCC8-206ENST00000484330 MYCNP04198 464 aaPredicted RBP10.5□□□□□ -0.73
ERCC8-206ENST00000484330 PIP4P2Q8N4L2 257 aa10.46□□□□□ -0.73
ERCC8-206ENST00000484330 HAX1O00165 279 aa10.45□□□□□ -0.74
ERCC8-206ENST00000484330 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
ERCC8-206ENST00000484330 FOXD4L1Q9NU39 408 aa10.43□□□□□ -0.74
ERCC8-206ENST00000484330 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
ERCC8-206ENST00000484330 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
ERCC8-206ENST00000484330 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
ERCC8-206ENST00000484330 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
ERCC8-206ENST00000484330 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
ERCC8-206ENST00000484330 ZBTB22O15209 634 aa10.32□□□□□ -0.76
ERCC8-206ENST00000484330 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
ERCC8-206ENST00000484330 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
ERCC8-206ENST00000484330 LHX8Q68G74 356 aa10.27□□□□□ -0.77
ERCC8-206ENST00000484330 EVX2Q03828 476 aa10.26□□□□□ -0.77
ERCC8-206ENST00000484330 ATXN8OSP0DMR3 200 aa10.12□□□□□ -0.79
ERCC8-206ENST00000484330 SPDYE2BA6NHP3 402 aa10.04□□□□□ -0.8
ERCC8-206ENST00000484330 SPDYE6P0CI01 402 aa10.04□□□□□ -0.8
ERCC8-206ENST00000484330 PRKAR2AP13861 404 aaKnown RBP10.04□□□□□ -0.8
ERCC8-206ENST00000484330 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
ERCC8-206ENST00000484330 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
ERCC8-206ENST00000484330 GABBR2O75899 941 aa9.99□□□□□ -0.81
ERCC8-206ENST00000484330 SPDYE1Q8NFV5 336 aaPredicted RBP9.96□□□□□ -0.82
ERCC8-206ENST00000484330 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
ERCC8-206ENST00000484330 FBLN2P98095 1184 aa9.93□□□□□ -0.82
ERCC8-206ENST00000484330 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
ERCC8-206ENST00000484330 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
ERCC8-206ENST00000484330 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
ERCC8-206ENST00000484330 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-206ENST00000484330 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
ERCC8-206ENST00000484330 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
ERCC8-206ENST00000484330 CLCN6P51797 869 aa9.76□□□□□ -0.85
ERCC8-206ENST00000484330 PRR29P0C7W0 189 aa9.75□□□□□ -0.85
ERCC8-206ENST00000484330 POTEMA6NI47 508 aa9.72□□□□□ -0.85
ERCC8-206ENST00000484330 CD44P16070 742 aaKnown RBP9.68□□□□□ -0.86
ERCC8-206ENST00000484330 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
ERCC8-206ENST00000484330 POTEGQ6S5H5 508 aa9.65□□□□□ -0.86
ERCC8-206ENST00000484330 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-206ENST00000484330 DCBLD2Q96PD2 775 aa9.6□□□□□ -0.87
ERCC8-206ENST00000484330 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
ERCC8-206ENST00000484330 OTUD5Q96G74 571 aa9.51□□□□□ -0.89
ERCC8-206ENST00000484330 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
ERCC8-206ENST00000484330 POTEB2H3BUK9 544 aa9.45□□□□□ -0.9
ERCC8-206ENST00000484330 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
ERCC8-206ENST00000484330 FKBP8Q14318 412 aa9.42□□□□□ -0.9
ERCC8-206ENST00000484330 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
ERCC8-206ENST00000484330 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
ERCC8-206ENST00000484330 STAG3Q9UJ98 1225 aa9.34□□□□□ -0.91
ERCC8-206ENST00000484330 PELP1Q8IZL8 1130 aaKnown RBP9.33□□□□□ -0.92
ERCC8-206ENST00000484330 PHF12Q96QT6 1004 aa9.3□□□□□ -0.92
ERCC8-206ENST00000484330 PAK3O75914 559 aaPredicted RBP9.28□□□□□ -0.92
ERCC8-206ENST00000484330 MAMSTRQ6ZN01 415 aa9.28□□□□□ -0.92
ERCC8-206ENST00000484330 POTEJP0CG39 1038 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms