RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MAGEC2Q9UBF1 373 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-216ENST00000484087 TRPV2Q9Y5S1 764 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 C5orf42Q9H799 3197 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 PLXNA4Q9HCM2 1894 aa7.64□□□□□ -1.19
BRCA1-216ENST00000484087 TLL1O43897 1013 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 HBP1O60381 514 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 MGEA5O60502 916 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 KIF20AO95235 890 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 FGFR1OPO95684 399 aaKnown RBP7.63□□□□□ -1.19
BRCA1-216ENST00000484087 TPM1P09493 284 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 ATP1A3P13637 1013 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 SFPQP23246 707 aaKnown RBP eCLIP7.63□□□□□ -1.19
BRCA1-216ENST00000484087 JAK3P52333 1124 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 STX17P56962 302 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 PSMD2Q13200 908 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 IKBKEQ14164 716 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 MCM6Q14566 821 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 CCDC85BQ15834 202 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-216ENST00000484087 TMEM119Q4V9L6 283 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 FAM26DQ5JW98 314 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 HYIQ5T013 277 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 TAF2Q6P1X5 1199 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-216ENST00000484087 UNC13DQ70J99 1090 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 ANO5Q75V66 913 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 KSR1Q8IVT5 923 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 FAM114A1Q8IWE2 563 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 KIAA0319LQ8IZA0 1049 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 GDPD5Q8WTR4 605 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 ARNTL2Q8WYA1 636 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 PNMA5Q96PV4 448 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 SLC9A7Q96T83 725 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 LXNQ9BS40 222 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 TMX1Q9H3N1 280 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 SLC28A3Q9HAS3 691 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 MSRAQ9UJ68 235 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 AKT3Q9Y243 479 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 NOC2LQ9Y3T9 749 aaKnown RBP7.63□□□□□ -1.19
BRCA1-216ENST00000484087 PCDHA2Q9Y5H9 948 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 PRRC2BQ5JSZ5 2229 aaKnown RBP7.63□□□□□ -1.19
BRCA1-216ENST00000484087 TTC3P53804 2025 aa7.63□□□□□ -1.19
BRCA1-216ENST00000484087 SMIM35A0A1B0GVV1 85 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 RRN3P2A6NIE6 340 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 KLRC4O43908 158 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 BAIAP3O94812 1187 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 GJB5O95377 273 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 SSBP05455 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 KRT18P05783 430 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 IDEP14735 1019 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 ZNF18P17022 549 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 IGFBP4P22692 258 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 RPA1P27694 616 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PRCPP42785 496 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 TAP1Q03518 808 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 NFX1Q12986 1120 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PPP2R5CQ13362 524 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 RAB30Q15771 203 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 ZNF484Q5JVG2 852 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 DNTTIP2Q5QJE6 756 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 EFCAB12Q6NXP0 572 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 RTN4RL1Q86UN2 441 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 FAM228AQ86W67 206 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 LRRC8AQ8IWT6 810 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 CCDC65Q8IXS2 484 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 SMYD4Q8IYR2 804 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 ADSSL1Q8N142 457 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 LINC01465Q8N7H1 131 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 CCDC112Q8NEF3 446 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 SEPT8Q92599 483 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 CEP89Q96ST8 783 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 KCNK17Q96T54 332 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 C17orf80Q9BSJ5 609 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 ZBED2Q9BTP6 218 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 CELF4Q9BZC1 486 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 BLOC1S4Q9NUP1 217 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PADI3Q9ULW8 664 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 KIAA1024Q9UPX6 916 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 DNM3Q9UQ16 869 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 GDAQ9Y2T3 454 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PCDHA11Q9Y5I1 949 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 RALGAPA2Q2PPJ7 1873 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 COL1A2P08123 1366 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 ABHD14A-ACY1A0A1B0GW23 586 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 LINC01553A4QN01 128 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 MYMKA6NI61 221 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 GPR32O75388 356 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PLA2G4BP0C869 781 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 MUTP22033 750 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 CCNE1P24864 410 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 SFNP31947 248 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 SLC26A2P50443 739 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 NLRP11P59045 1033 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 TBC1D8BQ0IIM8 1120 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PAK2Q13177 524 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 NOLC1Q14978 699 aaKnown RBP eCLIP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 TARBP2Q15633 366 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 PAN2Q504Q3 1202 aaKnown RBP7.62□□□□□ -1.19
BRCA1-216ENST00000484087 COBLL1Q53SF7 1204 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 HSP90AA4PQ58FG1 418 aa7.62□□□□□ -1.19
BRCA1-216ENST00000484087 CDKAL1Q5VV42 579 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms