RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 TELO2Q9Y4R8 837 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 KCNMB2Q9Y691 235 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 EMSYQ7Z589 1322 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 NRCAMQ92823 1304 aa10.03□□□□□ -0.8
COL8A1-207ENST00000483969 PLXNA1Q9UIW2 1896 aa10.02□□□□□ -0.8
COL8A1-207ENST00000483969 IGKV6D-21A0A0A0MT36 114 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 HYAL3O43820 417 aaPredicted RBP10.02□□□□□ -0.81
COL8A1-207ENST00000483969 MMP20O60882 483 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 PSMD10O75832 226 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 CCNE2O96020 404 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 CYP2C9P11712 490 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 U2AF2P26368 475 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL8A1-207ENST00000483969 MAGEA10P43363 369 aaPredicted RBP10.02□□□□□ -0.81
COL8A1-207ENST00000483969 TRAPPC10P48553 1259 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 ORC2Q13416 577 aaPredicted RBP10.02□□□□□ -0.81
COL8A1-207ENST00000483969 COX20Q5RI15 118 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 MCTP1Q6DN14 999 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 MFSD5Q6N075 450 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 PRR23CQ6ZRP0 262 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 MIER3Q7Z3K6 550 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 RPUSD2Q8IZ73 545 aaKnown RBP10.02□□□□□ -0.81
COL8A1-207ENST00000483969 CACTIN-AS1Q8N1I8 211 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 ETNPPLQ8TBG4 499 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 AFAP1L1Q8TED9 768 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 PPP1R13LQ8WUF5 828 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 ATP6V0A1Q93050 837 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 NSUN5Q96P11 429 aaKnown RBP10.02□□□□□ -0.81
COL8A1-207ENST00000483969 KCNMB3Q9NPA1 279 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 DISC1Q9NRI5 854 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 NRBP2Q9NSY0 501 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 SETD4Q9NVD3 440 aa10.02□□□□□ -0.81
COL8A1-207ENST00000483969 SLC37A4O43826 429 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 HBP1O60381 514 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 DKC1O60832 514 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL8A1-207ENST00000483969 PARNO95453 639 aaKnown RBP10.01□□□□□ -0.81
COL8A1-207ENST00000483969 HSP90AA1P07900 732 aaKnown RBP10.01□□□□□ -0.81
COL8A1-207ENST00000483969 PDIA4P13667 645 aaKnown RBP10.01□□□□□ -0.81
COL8A1-207ENST00000483969 MARK3P27448 753 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 FPGSQ05932 587 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 PPFIA1Q13136 1202 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 PPIGQ13427 754 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL8A1-207ENST00000483969 CALCRLQ16602 461 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 CKAP2LQ8IYA6 745 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 PCYT2Q99447 389 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 NOC4LQ9BVI4 516 aaKnown RBP10.01□□□□□ -0.81
COL8A1-207ENST00000483969 UNC45AQ9H3U1 944 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 GABBR1Q9UBS5 961 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 PCDHA12Q9UN75 941 aa10.01□□□□□ -0.81
COL8A1-207ENST00000483969 SMCHD1A6NHR9 2005 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 BAZ2BQ9UIF8 2168 aaKnown RBP10□□□□□ -0.81
COL8A1-207ENST00000483969 A0A1W2PPC1 479 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 KRTAP9-1A8MXZ3 250 aaPredicted RBP10□□□□□ -0.81
COL8A1-207ENST00000483969 CHMP2AO43633 222 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 NEMFO60524 1076 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 RPLP2P05387 115 aaKnown RBP10□□□□□ -0.81
COL8A1-207ENST00000483969 INSRRP14616 1297 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 ITGB8P26012 769 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 CYP2C18P33260 490 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 MCM7P33993 719 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 RFC2P35250 354 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 TXKP42681 527 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 CCL23P55773 120 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 ZNF200P98182 395 aaPredicted RBP10□□□□□ -0.81
COL8A1-207ENST00000483969 PPP2R5CQ13362 524 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 PLCB4Q15147 1175 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 EPHA7Q15375 998 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 ZNF174Q15697 407 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 ZNF484Q5JVG2 852 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 TTC38Q5R3I4 469 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 RSPH3Q86UC2 560 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 CCDC60Q8IWA6 550 aaPredicted RBP10□□□□□ -0.81
COL8A1-207ENST00000483969 TMEM130Q8N3G9 435 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 ATP8B4Q8TF62 1192 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 HAS1Q92839 578 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 COL26A1Q96A83 441 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 FAM167AQ96KS9 214 aa10□□□□□ -0.81
COL8A1-207ENST00000483969 LRRC37A2A6NM11 1700 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 KIF28PB7ZC32 967 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 J3QW42 95 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 TREHO43280 583 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 CAND2O75155 1236 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 P4HBP07237 508 aaKnown RBP9.99□□□□□ -0.81
COL8A1-207ENST00000483969 IQCF3P0C7M6 154 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
COL8A1-207ENST00000483969 HOXC8P31273 242 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 IGBP1P78318 339 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 ADAM17P78536 824 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 RILPL1Q5EBL4 403 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 TAF2Q6P1X5 1199 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 C16orf46Q6P387 395 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 B3GNT9Q6UX72 402 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 SERINC5Q86VE9 423 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 IL22RA1Q8N6P7 574 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 GJA10Q969M2 543 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 MTMR9Q96QG7 549 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 MUC3BQ9H195 1237 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 TTC12Q9H892 705 aaPredicted RBP9.99□□□□□ -0.81
COL8A1-207ENST00000483969 IL23AQ9NPF7 189 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms