RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 CUTAO60888 179 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 PPP6R2O75170 966 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 TBCAO75347 108 aaKnown RBP11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 DGKIO75912 1065 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 FAM13AO94988 1023 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 NAMPTP43490 491 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 HTRA4P83105 476 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 MBTD1Q05BQ5 628 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 MAPK6Q16659 721 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 NOTUMQ6P988 496 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 C1orf186Q6ZWK4 172 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 CDR2LQ86X02 465 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 SYT2Q8N9I0 419 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 LPPQ93052 612 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 SPATA32Q96LK8 384 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 C17orf80Q9BSJ5 609 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 CCSER1Q9C0I3 900 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 CHST12Q9NRB3 414 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 FAM105AQ9NUU6 356 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 TMEM161AQ9NX61 479 aa11.03□□□□□ -0.64
SPTLC1-206ENST00000482632 SLC16A4O15374 487 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 HOXA2O43364 376 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 NPTXRO95502 500 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 SKIP12755 728 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 COL9A1P20849 921 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 MATR3P43243 847 aaKnown RBP eCLIP11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 RAB27AP51159 221 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 PRPF4BQ13523 1007 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 ATL3Q6DD88 541 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 CCDC73Q6ZRK6 1079 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 DYMQ7RTS9 669 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 TMEM192Q8IY95 271 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 HELQQ8TDG4 1101 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 LRRC15Q8TF66 581 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 REEP2Q9BRK0 252 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 TIPINQ9BVW5 301 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 GBP3Q9H0R5 595 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 BLOC1S4Q9NUP1 217 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 PRMT7Q9NVM4 692 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 FAM13BQ9NYF5 915 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 STK17AQ9UEE5 414 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 ZDHHC9Q9Y397 364 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 MRPL42Q9Y6G3 142 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 CDH23Q9H251 3354 aa11.02□□□□□ -0.65
SPTLC1-206ENST00000482632 TRIP11Q15643 1979 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 A0A0U1RQF3 1178 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 EPOPA6NHQ4 379 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 K7ERI5 159 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 ARF4P18085 180 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 GUCY2CP25092 1073 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 AXLP30530 894 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 NPTX2P47972 431 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 EFNA5P52803 228 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 SMTNP53814 917 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 NUCB2P80303 420 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 POU5F1BQ06416 359 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 CCDC85BQ15834 202 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 CDCA2Q69YH5 1023 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 CMTR2Q8IYT2 770 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 HACE1Q8IYU2 909 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 DAW1Q8N136 415 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 KCTD17Q8N5Z5 321 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 MYCT1Q8N699 235 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 DHX58Q96C10 678 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 PGBD4Q96DM1 585 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 BICD1Q96G01 975 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 ADPGKQ9BRR6 497 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 EIF2AQ9BY44 585 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 NFKBIZQ9BYH8 718 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 ELAC1Q9H777 363 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 KCND2Q9NZV8 630 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 HCSTQ9UBK5 93 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 PCDHA7Q9UN72 937 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 USP20Q9Y2K6 914 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 PCDHB2Q9Y5E7 798 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 PLXNA4Q9HCM2 1894 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 TTC28Q96AY4 2481 aa11.01□□□□□ -0.65
SPTLC1-206ENST00000482632 A0A087X0B3 334 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 K7ENM7 598 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 N4BP3O15049 544 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 EOMESO95936 686 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 HARSP12081 509 aaKnown RBP11□□□□□ -0.65
SPTLC1-206ENST00000482632 ITGA4P13612 1032 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 PLS3P13797 630 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 IDEP14735 1019 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 ATF7P17544 494 aaPredicted RBP11□□□□□ -0.65
SPTLC1-206ENST00000482632 HOXA11P31270 313 aaPredicted RBP11□□□□□ -0.65
SPTLC1-206ENST00000482632 DDIT3P35638 169 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 ERVK-21P61565 698 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 RNASELQ05823 741 aaKnown RBP11□□□□□ -0.65
SPTLC1-206ENST00000482632 STRN3Q13033 797 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 MAPK7Q13164 816 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 GPM6BQ13491 265 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 PCBP1Q15365 356 aaKnown RBP eCLIP11□□□□□ -0.65
SPTLC1-206ENST00000482632 SKIV2LQ15477 1246 aaKnown RBP11□□□□□ -0.65
SPTLC1-206ENST00000482632 EPC2Q52LR7 807 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 ARSHQ5FYA8 562 aa11□□□□□ -0.65
SPTLC1-206ENST00000482632 CLLU1OSQ5K130 101 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms