RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 PSMD2Q13200 908 aa15.35■□□□□ 0.05
PCIF1-202ENST00000479348 UBXN11Q5T124 520 aa15.35■□□□□ 0.05
PCIF1-202ENST00000479348 NT5DC1Q5TFE4 455 aa15.35■□□□□ 0.05
PCIF1-202ENST00000479348 FAM109BQ6ICB4 259 aaPredicted RBP15.35■□□□□ 0.05
PCIF1-202ENST00000479348 MRPL10Q7Z7H8 261 aaKnown RBP15.35■□□□□ 0.05
PCIF1-202ENST00000479348 ZNF598Q86UK7 904 aaKnown RBP15.35■□□□□ 0.05
PCIF1-202ENST00000479348 MAP4K3Q8IVH8 894 aa15.35■□□□□ 0.05
PCIF1-202ENST00000479348 GRAMD1CQ8IYS0 662 aa15.35■□□□□ 0.05
PCIF1-202ENST00000479348 HACE1Q8IYU2 909 aa15.35■□□□□ 0.05
PCIF1-202ENST00000479348 TRIM6Q9C030 488 aaPredicted RBP15.35■□□□□ 0.05
PCIF1-202ENST00000479348 PCDHB2Q9Y5E7 798 aa15.35■□□□□ 0.05
PCIF1-202ENST00000479348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.34■□□□□ 0.05
PCIF1-202ENST00000479348 GRXCR1A8MXD5 290 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 TOM1L1O75674 476 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 DGKIO75912 1065 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 GCNT3O95395 438 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 PIGRP01833 764 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 DPYDQ12882 1025 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 POSTNQ15063 836 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 DCAF4L1Q3SXM0 396 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 FAM26FQ5R3K3 315 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 YME1L1Q96TA2 773 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 TARS2Q9BW92 718 aaKnown RBP15.34■□□□□ 0.05
PCIF1-202ENST00000479348 PDZD7Q9H5P4 517 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 UBN1Q9NPG3 1134 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 EXOC1Q9NV70 894 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 EXOC7Q9UPT5 735 aa15.34■□□□□ 0.05
PCIF1-202ENST00000479348 TTLL13PA6NNM8 815 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 RBAK-RBAKDNI3L0D1 243 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 EIF3DO15371 548 aaKnown RBP eCLIP15.33■□□□□ 0.04
PCIF1-202ENST00000479348 KLRC4O43908 158 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 RPN1P04843 607 aaKnown RBP15.33■□□□□ 0.04
PCIF1-202ENST00000479348 EDN1P05305 212 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 ATF7P17544 494 aaPredicted RBP15.33■□□□□ 0.04
PCIF1-202ENST00000479348 PROZP22891 400 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 CASP1P29466 404 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 KCNB1Q14721 858 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 ZC2HC1CQ53FD0 456 aaPredicted RBP15.33■□□□□ 0.04
PCIF1-202ENST00000479348 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.04
PCIF1-202ENST00000479348 GPR153Q6NV75 609 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 FAM117BQ6P1L5 589 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
PCIF1-202ENST00000479348 ZNF689Q96CS4 500 aaPredicted RBP15.33■□□□□ 0.04
PCIF1-202ENST00000479348 BICD1Q96G01 975 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 ACCSQ96QU6 501 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 EIF2AQ9BY44 585 aaKnown RBP15.33■□□□□ 0.04
PCIF1-202ENST00000479348 PBX4Q9BYU1 374 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 PTPRHQ9HD43 1115 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 LMBRD1Q9NUN5 540 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 TBC1D7Q9P0N9 293 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 IPPQ9Y573 584 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 TRIOBPQ9H2D6 2365 aa15.33■□□□□ 0.04
PCIF1-202ENST00000479348 ZMYM2Q9UBW7 1377 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 TMEM265A0A087WTH1 108 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 HNRNPDLO14979 420 aaKnown RBP15.32■□□□□ 0.04
PCIF1-202ENST00000479348 RHOBTB3O94955 611 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 SMC2O95347 1197 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 NPTXRO95502 500 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 MCF2P10911 925 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 DNAJB2P25686 324 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 LIG4P49917 911 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 RABGGTBP53611 331 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 KMT5BQ4FZB7 885 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 EEF1DP3Q658K8 133 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 SLFN12LQ6IEE8 588 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 MPZL3Q6UWV2 235 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 TMCO2Q7Z6W1 182 aaPredicted RBP15.32■□□□□ 0.04
PCIF1-202ENST00000479348 CMTR2Q8IYT2 770 aaKnown RBP15.32■□□□□ 0.04
PCIF1-202ENST00000479348 ABI1Q8IZP0 508 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 SMG8Q8ND04 991 aaKnown RBP15.32■□□□□ 0.04
PCIF1-202ENST00000479348 GSDMAQ96QA5 445 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 TCHPQ9BT92 498 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 GTPBP4Q9BZE4 634 aaKnown RBP15.32■□□□□ 0.04
PCIF1-202ENST00000479348 TMEM117Q9H0C3 514 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 COL4A6Q14031 1691 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 UBE4BO95155 1302 aa15.32■□□□□ 0.04
PCIF1-202ENST00000479348 CLDN3O15551 220 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 PRR29P0C7W0 189 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 MYBP10242 640 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 ITGA4P13612 1032 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 MCL1Q07820 350 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 KYAT1Q16773 422 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 GLB1LQ6UWU2 654 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 EPM2AIP1Q7L775 607 aaPredicted RBP15.31■□□□□ 0.04
PCIF1-202ENST00000479348 CDR2LQ86X02 465 aaPredicted RBP15.31■□□□□ 0.04
PCIF1-202ENST00000479348 RNF169Q8NCN4 708 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 SPATA20Q8TB22 786 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 ZNF507Q8TCN5 953 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 TIFAQ96CG3 184 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 SLC28A3Q9HAS3 691 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 RC3H2Q9HBD1 1191 aaKnown RBP15.31■□□□□ 0.04
PCIF1-202ENST00000479348 RMND1Q9NWS8 449 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 USP20Q9Y2K6 914 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 GIT1Q9Y2X7 761 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 PTPRSQ13332 1948 aa15.31■□□□□ 0.04
PCIF1-202ENST00000479348 ABLIM1O14639 778 aa15.3■□□□□ 0.04
PCIF1-202ENST00000479348 FGFR1P11362 822 aa15.3■□□□□ 0.04
PCIF1-202ENST00000479348 IBSPP21815 317 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms