RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ADGRE4PQ86SQ3 457 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 RPL10LQ96L21 214 aaKnown RBP6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 C8orf49Q96NF6 230 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 WWC2-AS2Q96NR7 200 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 OR14A2Q96R54 314 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 MPHOSPH9Q99550 1183 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 TCF7L1Q9HCS4 588 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 IL23AQ9NPF7 189 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 PLA2G3Q9NZ20 509 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 IP6K2Q9UHH9 426 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 ANKRD6Q9Y2G4 727 aa6.07□□□□□ -1.44
SMNDC1-205ENST00000477763 A0A1W2PRX2 142 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 PCDHGA12O60330 932 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 ALDH1A2O94788 518 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 ABLIM3O94929 683 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 VCAM1P19320 739 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 AGXTP21549 392 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 COMTP21964 271 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 MTNR1BP49286 362 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 ADAM17P78536 824 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 MGAT5Q09328 741 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 GRM7Q14831 915 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 MUM1Q2TAK8 710 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 ANO4Q32M45 955 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 HSP90AB2PQ58FF8 381 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 C19orf54Q5BKX5 351 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 KRT40Q6A162 431 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 CMTM4Q8IZR5 234 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 CPA6Q8N4T0 437 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 JPH3Q8WXH2 748 aaPredicted RBP6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 EDAQ92838 391 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 DVL3Q92997 716 aaPredicted RBP6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 CDK5RAP1Q96SZ6 601 aaKnown RBP6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 CDH19Q9H159 772 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 IFT122Q9HBG6 1241 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 ZNF277Q9NRM2 450 aaPredicted RBP6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 DPP7Q9UHL4 492 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 ST6GALNAC2Q9UJ37 374 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 ZBTB21Q9ULJ3 1066 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 GIT1Q9Y2X7 761 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 TCAF1Q9Y4C2 921 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 PCDHGA9Q9Y5G4 932 aaKnown RBP6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 PCDHGA8Q9Y5G5 932 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 PCDHGA7Q9Y5G6 932 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 PCDHGA6Q9Y5G7 932 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 PCDHGA3Q9Y5H0 932 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 PCDHGA2Q9Y5H1 932 aa6.06□□□□□ -1.44
SMNDC1-205ENST00000477763 TSPAN6O43657 245 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 LTA4HP09960 611 aaKnown RBP6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 U2AF1L5P0DN76 240 aaPredicted RBP6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 U2AF1Q01081 240 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 FOXL1Q12952 345 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 TMEM240Q5SV17 173 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 GJC2Q5T442 439 aaPredicted RBP6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 CCDC181Q5TID7 509 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 JADE3Q92613 823 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 FATE1Q969F0 183 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 CCDC136Q96JN2 1154 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 KLC2Q9H0B6 622 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 DEF6Q9H4E7 631 aa6.05□□□□□ -1.44
SMNDC1-205ENST00000477763 TMEM127O75204 238 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 RFPL1O75677 317 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 ADRB1P08588 477 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 OSMP13725 252 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 ZNF20P17024 532 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 MSX2P35548 267 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 CDK17Q00537 523 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 ODF1Q14990 250 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 ACAP1Q15027 740 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 MBNL2Q5VZF2 373 aaKnown RBP6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 MAMDC4Q6UXC1 1216 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 Q6ZSN1 163 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 TSPEARQ8WU66 669 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 HSPBAP1Q96EW2 488 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 FAM89AQ96GI7 184 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 TEKT5Q96M29 485 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 TCF25Q9BQ70 676 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 RTFDC1Q9BY42 306 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 ENKD1Q9H0I2 346 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 ING3Q9NXR8 418 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 RCAN3Q9UKA8 241 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 TESMINQ9Y4I5 508 aa6.04□□□□□ -1.44
SMNDC1-205ENST00000477763 UBE2QL1A1L167 161 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 C1QTNF3-AMACRE9PGA6 284 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 IL33O95760 270 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 SCGB1D2O95969 90 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 PF4V1P10720 104 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 NPEPPSP55786 919 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 HHEXQ03014 270 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 R3HDM1Q15032 1099 aaKnown RBP6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 LRRC41Q15345 812 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 UBE3CQ15386 1083 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 MFSD5Q6N075 450 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 FAM111BQ6SJ93 734 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 BTNL9Q6UXG8 535 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 GGNQ86UU5 652 aa6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 CMTR2Q8IYT2 770 aaKnown RBP6.03□□□□□ -1.44
SMNDC1-205ENST00000477763 MYO1HQ8N1T3 1032 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms