RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 FNDC1Q4ZHG4 1894 aaPredicted RBP20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 TTLL13PA6NNM8 815 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 EIF3DO15371 548 aaKnown RBP eCLIP20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 GJB5O95377 273 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 GCNT3O95395 438 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 EOMESO95936 686 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 KCNB1Q14721 858 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 KMT5BQ4FZB7 885 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 ZC2HC1CQ53FD0 456 aaPredicted RBP20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 L1TD1Q5T7N2 865 aaKnown RBP20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 ATF7IP2Q5U623 682 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 APBB1IPQ7Z5R6 666 aaPredicted RBP20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 ADPGKQ9BRR6 497 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 TBC1D7Q9P0N9 293 aa20.84■□□□□ 0.93
CTDSP1-207ENST00000473420 UBE4BO95155 1302 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 RANBP2P49792 3224 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 RHOBTB3O94955 611 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 PROZP22891 400 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 SMAD3P84022 425 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 PNOCQ13519 176 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 DCAF4L1Q3SXM0 396 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 MRPL10Q7Z7H8 261 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 ZNF598Q86UK7 904 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 TARS2Q9BW92 718 aaKnown RBP20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 PTPRHQ9HD43 1115 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 LRFN2Q9ULH4 789 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 EXOC7Q9UPT5 735 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 PCDHB7Q9Y5E2 793 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 PCDHB2Q9Y5E7 798 aa20.83■□□□□ 0.93
CTDSP1-207ENST00000473420 HOXA2O43364 376 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 TOM1L1O75674 476 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 SMC2O95347 1197 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 MYBP10242 640 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 CASP5P51878 434 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 HTRA4P83105 476 aaPredicted RBP20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 EPM2AIP1Q7L775 607 aaPredicted RBP20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 SPATA20Q8TB22 786 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 RSPH1Q8WYR4 309 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 PGBD4Q96DM1 585 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 GSDMAQ96QA5 445 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 ACCSQ96QU6 501 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 EIF2AQ9BY44 585 aaKnown RBP20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 FGFBP2Q9BYJ0 223 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 TRIM6Q9C030 488 aaPredicted RBP20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 TMEM206Q9H813 350 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 RMND1Q9NWS8 449 aa20.82■□□□□ 0.92
CTDSP1-207ENST00000473420 HNRNPDLO14979 420 aaKnown RBP20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 DGKIO75912 1065 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 UPP2O95045 317 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 NPTXRO95502 500 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 ATF7P17544 494 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 LIG4P49917 911 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 RAB30Q15771 203 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 EEF1DP3Q658K8 133 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 FAM109BQ6ICB4 259 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 MPZL3Q6UWV2 235 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 CDR2LQ86X02 465 aaPredicted RBP20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 HACE1Q8IYU2 909 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 ZNF507Q8TCN5 953 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 HPS3Q969F9 1004 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 BICD1Q96G01 975 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 RAD9AQ99638 391 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 ZBED2Q9BTP6 218 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 RC3H2Q9HBD1 1191 aaKnown RBP20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 USP20Q9Y2K6 914 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 IPPQ9Y573 584 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 INSL6Q9Y581 213 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 PCDHA11Q9Y5I1 949 aa20.81■□□□□ 0.92
CTDSP1-207ENST00000473420 ABLIM1O14639 778 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 MCF2P10911 925 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 MCM4P33991 863 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 ZNF568Q3ZCX4 644 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 TMCO2Q7Z6W1 182 aaPredicted RBP20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 SMG8Q8ND04 991 aaKnown RBP20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 SMARCE1Q969G3 411 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 ZNF689Q96CS4 500 aaPredicted RBP20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 GTPBP4Q9BZE4 634 aaKnown RBP20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 CDT1Q9H211 546 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 SLC39A2Q9NP94 309 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 UBN1Q9NPG3 1134 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 PCDHA5Q9Y5H7 936 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 ZMYM2Q9UBW7 1377 aa20.8■□□□□ 0.92
CTDSP1-207ENST00000473420 TRIOBPQ9H2D6 2365 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 GRXCR1A8MXD5 290 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 TLL1O43897 1013 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 PRPF6O94906 941 aaKnown RBP20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 MBD3O95983 291 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 MCL1Q07820 350 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 STK4Q13043 487 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 BMT2Q1RMZ1 405 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 KIAA0895Q8NCT3 520 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 GLIS3Q8NEA6 775 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 STYXL1Q9Y6J8 313 aa20.79■□□□□ 0.92
CTDSP1-207ENST00000473420 RALGAPA2Q2PPJ7 1873 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 CLDN3O15551 220 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 ITGA4P13612 1032 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 KCNA1Q09470 495 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 NOLC1Q14978 699 aaKnown RBP eCLIP20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 SLFN12LQ6IEE8 588 aa20.78■□□□□ 0.92
CTDSP1-207ENST00000473420 FAM117BQ6P1L5 589 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms