RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 ZNF623O75123 536 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 PRPF6O94906 941 aaKnown RBP17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 LDHAP00338 332 aaKnown RBP17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 PRKCSHP14314 528 aaPredicted RBP17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 ARF4P18085 180 aaPredicted RBP17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 CCNE1P24864 410 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 CYP2C18P33260 490 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 HOXD13P35453 343 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 RAB27AP51159 221 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 ENPEPQ07075 957 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 PPIGQ13427 754 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 DSC3Q14574 896 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 DCAF4L1Q3SXM0 396 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 ZCWPW2Q504Y3 356 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 CNKSR3Q6P9H4 555 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 HPS3Q969F9 1004 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 ADPGKQ9BRR6 497 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 FGFBP2Q9BYJ0 223 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 NAT10Q9H0A0 1025 aaKnown RBP17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 C1orf112Q9NSG2 853 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 TBC1D7Q9P0N9 293 aa17.59■□□□□ 0.41
PCOLCE-205ENST00000472348 UMODL1Q5DID0 1318 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 ABLIM1O14639 778 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 MAPK13O15264 365 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 TGFB1I1O43294 461 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 CALUO43852 315 aaPredicted RBP17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 BAIAP3O94812 1187 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 MCF2P10911 925 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 GHRP10912 638 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 ZSCAN20P17040 1043 aaPredicted RBP17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 LIG4P49917 911 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 MCCD1P59942 119 aaPredicted RBP17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 TYRO3Q06418 890 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 MCL1Q07820 350 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 ATF7IP2Q5U623 682 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 SLC27A1Q6PCB7 646 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 MPZL3Q6UWV2 235 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 ZC3H3Q8IXZ2 948 aaKnown RBP17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 SYCP3Q8IZU3 236 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 P2RX5Q93086 422 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 PPP1R12CQ9BZL4 782 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 KIAA1586Q9HCI6 787 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 IL23AQ9NPF7 189 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 RGS18Q9NS28 235 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 RWDD2AQ9UIY3 292 aa17.58■□□□□ 0.4
PCOLCE-205ENST00000472348 ABHD14A-ACY1A0A1B0GW23 586 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 BIN1O00499 593 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 CLDN3O15551 220 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 RPL13P26373 211 aaKnown RBP17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 CD52P31358 61 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 PAK1Q13153 545 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 DPCR1Q3MIW9 517 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 GLIS3Q8NEA6 775 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 FBXL18Q96ME1 805 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 TSPAN18Q96SJ8 248 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 TSG101Q99816 390 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 TSPYL2Q9H2G4 693 aaPredicted RBP17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 ELAC1Q9H777 363 aaKnown RBP17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 PRDM5Q9NQX1 630 aaPredicted RBP17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 TTC3P53804 2025 aa17.57■□□□□ 0.4
PCOLCE-205ENST00000472348 CITO14578 2027 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 A0A0B4J269 797 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 A0A0U1RQF3 1178 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 SYCE3A1L190 88 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 CD44P16070 742 aaKnown RBP17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 SYN1P17600 705 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 ITGB8P26012 769 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 CCL23P55773 120 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 FAM189BP81408 668 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 FKBP3Q00688 224 aaKnown RBP17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 FPGSQ05932 587 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 KCNA1Q09470 495 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 NFX1Q12986 1120 aaKnown RBP17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 LRSAM1Q6UWE0 723 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 DBF4BQ8NFT6 615 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 PPP1R16BQ96T49 567 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 MKNK1Q9BUB5 465 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 TARS2Q9BW92 718 aaKnown RBP17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 PDZD7Q9H5P4 517 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 AGPAT3Q9NRZ7 376 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 DMAC2Q9NW81 257 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 PIN4Q9Y237 131 aaKnown RBP17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 RALGAPA2Q2PPJ7 1873 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 CEP290O15078 2479 aa17.56■□□□□ 0.4
PCOLCE-205ENST00000472348 FGFR1OPO95684 399 aaKnown RBP17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 EOMESO95936 686 aa17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 EDN1P05305 212 aa17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 ACTN1P12814 892 aa17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 IKBKEQ14164 716 aa17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 NOLC1Q14978 699 aaKnown RBP eCLIP17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 SLC39A4Q6P5W5 647 aa17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 PSRC1Q6PGN9 363 aaPredicted RBP17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 SLC24A5Q71RS6 500 aa17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 MRPL10Q7Z7H8 261 aaKnown RBP17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 HACE1Q8IYU2 909 aa17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 ENOX1Q8TC92 643 aaKnown RBP17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 VWCEQ96DN2 955 aa17.55■□□□□ 0.4
PCOLCE-205ENST00000472348 BICD1Q96G01 975 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms