RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 C6P13671 934 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 TCF7P36402 384 aaPredicted RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 ALDH7A1P49419 539 aaKnown RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 KRT76Q01546 638 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 PFKPQ01813 784 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 GHRHRQ02643 423 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 CREB5Q02930 508 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 TRDNQ13061 729 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 UBAP2LQ14157 1087 aaKnown RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 DSC3Q14574 896 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 ALX1Q15699 326 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 ZNF574Q6ZN55 896 aaPredicted RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 CENPQQ7L2Z9 268 aaPredicted RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 GPR155Q7Z3F1 870 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 RALYLQ86SE5 291 aaKnown RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 MARCH9Q86YJ5 346 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 LRRC43Q8N309 656 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 ADAMTS14Q8WXS8 1223 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 CCDC136Q96JN2 1154 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 INPP4AQ96PE3 977 aaPredicted RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 PPP1R16BQ96T49 567 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 PCYT2Q99447 389 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 VAT1LQ9HCJ6 419 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 ANAPC4Q9UJX5 808 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 MRPL11Q9Y3B7 192 aaKnown RBP6.7□□□□□ -1.34
VARS-222ENST00000470953 PCDHA1Q9Y5I3 950 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 KDM3AQ9Y4C1 1321 aa6.7□□□□□ -1.34
VARS-222ENST00000470953 AHCTF1Q8WYP5 2266 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 M0QZ92 97 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 INPPL1O15357 1258 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 DHX16O60231 1041 aaKnown RBP6.69□□□□□ -1.34
VARS-222ENST00000470953 ATP9AO75110 1047 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 PAPSS2O95340 614 aaPredicted RBP6.69□□□□□ -1.34
VARS-222ENST00000470953 SPATA31D3P0C874 917 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 CCDC192P0DO97 292 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 GSPT1P15170 499 aaKnown RBP6.69□□□□□ -1.34
VARS-222ENST00000470953 KLRC2P26717 231 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 CCND2P30279 289 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 ADSSP30520 456 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 IL12RB1P42701 662 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 PXNP49023 591 aaPredicted RBP6.69□□□□□ -1.34
VARS-222ENST00000470953 NEDD9Q14511 834 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 PLCB4Q15147 1175 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 CCDC178Q5BJE1 867 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 SPATA31D4Q6ZUB0 917 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 DDX53Q86TM3 631 aaKnown RBP6.69□□□□□ -1.34
VARS-222ENST00000470953 FAM228AQ86W67 206 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 TBC1D10CQ8IV04 446 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 RNF169Q8NCN4 708 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 CMASQ8NFW8 434 aaPredicted RBP6.69□□□□□ -1.34
VARS-222ENST00000470953 HELQQ8TDG4 1101 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 SMG7Q92540 1137 aaKnown RBP6.69□□□□□ -1.34
VARS-222ENST00000470953 TMEM169Q96HH4 297 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 KXD1Q9BQD3 176 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 DSCC1Q9BVC3 393 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 KRT23Q9C075 422 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 ELAC1Q9H777 363 aaKnown RBP6.69□□□□□ -1.34
VARS-222ENST00000470953 KAT14Q9H8E8 782 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 CNNM2Q9H8M5 875 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 JMJD4Q9H9V9 463 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 MAN1C1Q9NR34 630 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.69□□□□□ -1.34
VARS-222ENST00000470953 EML5Q05BV3 1969 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 NEDD4P46934 1319 aa6.69□□□□□ -1.34
VARS-222ENST00000470953 MYH6P13533 1939 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 ERICH2A1L162 156 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 BCLAF3A2AJT9 711 aaKnown RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 B4E1Z4 1266 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 KHNYNO15037 678 aaKnown RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 MEFVO15553 781 aaPredicted RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 B4GALT3O60512 393 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 FGRP09769 529 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 MYF5P13349 255 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 ELAVL4P26378 380 aaKnown RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 EIF2S3P41091 472 aaKnown RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 MAPK8P45983 427 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 NT5C2P49902 561 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 POLGP54098 1239 aaPredicted RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 IRX4P78413 519 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 SEMA3BQ13214 749 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 SART3Q15020 963 aaKnown RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 PLK5Q496M5 336 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 Q6ZS52 159 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 PPFIBP1Q86W92 1011 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 ECHDC2Q86YB7 292 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 SPEM1Q8N4L4 309 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 IGSF21Q96ID5 467 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 ZC3H10Q96K80 434 aaKnown RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 ZKSCAN3Q9BRR0 538 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 DUSP15Q9H1R2 295 aaPredicted RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 TCP11L1Q9NUJ3 509 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 ERAP1Q9NZ08 941 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 PCDHA2Q9Y5H9 948 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 U3KPZ7 1027 aaPredicted RBP6.68□□□□□ -1.34
VARS-222ENST00000470953 BSNQ9UPA5 3926 aa6.68□□□□□ -1.34
VARS-222ENST00000470953 NUP205Q92621 2012 aa6.67□□□□□ -1.34
VARS-222ENST00000470953 CACNA1DQ01668 2161 aa6.67□□□□□ -1.34
VARS-222ENST00000470953 TLN1Q9Y490 2541 aaKnown RBP6.67□□□□□ -1.34
VARS-222ENST00000470953 SMIM35A0A1B0GVV1 85 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms