RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 AGRPO00253 132 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 UFL1O94874 794 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 CENPBP07199 599 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-204ENST00000463622 SLC6A11P48066 632 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 GTF2A2P52657 109 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 ITGA1P56199 1179 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 CRHR2Q13324 411 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 STEAP3Q658P3 488 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 PRRT2Q7Z6L0 340 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-204ENST00000463622 Q8N1Y9 231 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 KYQ8NBH2 561 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 FRAT1Q92837 279 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-204ENST00000463622 WNK4Q96J92 1243 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 RBPJLQ9UBG7 517 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 PAPPA2Q9BXP8 1791 aa4.51□□□□□ -1.69
SCFD1-204ENST00000463622 A0A1W2PPC1 479 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 DDX3XO00571 662 aaKnown RBP eCLIP4.5□□□□□ -1.691e-13■■■■□ 23.8
SCFD1-204ENST00000463622 HGSO14964 777 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-204ENST00000463622 PRODHO43272 600 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 HOXB7P09629 217 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 THBS2P35442 1172 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 KRTAP10-2P60368 255 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 AIMP1Q12904 312 aaKnown RBP4.5□□□□□ -1.69
SCFD1-204ENST00000463622 ARHGEF6Q15052 776 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 STRIP1Q5VSL9 837 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 YOD1Q5VVQ6 348 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-204ENST00000463622 OTUD7BQ6GQQ9 843 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 KCNT2Q6UVM3 1135 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 FAM126BQ8IXS8 530 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 PLBD2Q8NHP8 589 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 EXOC6Q8TAG9 804 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 ADAMTS17Q8TE56 1095 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 KCTD13Q8WZ19 329 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 DEFB129Q9H1M3 183 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 TCRBV5S2A0A599 114 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 H7BY64 318 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 CT47B1P0C2W7 299 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-204ENST00000463622 GJA9P57773 515 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 ALDH1L2Q3SY69 923 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 PHF19Q5T6S3 580 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 ZC3H18Q86VM9 953 aaKnown RBP4.5□□□□□ -1.69
SCFD1-204ENST00000463622 APOBEC3FQ8IUX4 373 aaKnown RBP4.5□□□□□ -1.69
SCFD1-204ENST00000463622 TMEM57Q8N5G2 664 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 SLC43A3Q8NBI5 491 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCFD1-204ENST00000463622 CLMNQ96JQ2 1002 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 PHF20Q9BVI0 1012 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 MXD3Q9BW11 206 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 LNPKQ9C0E8 428 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 EPN3Q9H201 632 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 WASF3Q9UPY6 502 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 PCDHB4Q9Y5E5 795 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 NPFFR2Q9Y5X5 522 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 PTCH2Q9Y6C5 1203 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 CEP290O15078 2479 aa4.5□□□□□ -1.69
SCFD1-204ENST00000463622 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
SCFD1-204ENST00000463622 AKAP11Q9UKA4 1901 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 COL4A1P02462 1669 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 PI4KAP2A4QPH2 592 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 TADA3O75528 432 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 IGKV5-2P06315 115 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 COL6A2P12110 1019 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 RPL13P26373 211 aaKnown RBP4.49□□□□□ -1.69
SCFD1-204ENST00000463622 GRIN1Q05586 938 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 MAP4K2Q12851 820 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 ADAM9Q13443 819 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 PRKG1Q13976 671 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 TESK1Q15569 626 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 SLC4A8Q2Y0W8 1093 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 SLC9C1Q4G0N8 1177 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 CCDC30Q5VVM6 783 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 ATF7IPQ6VMQ6 1270 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 PI4KAP1Q8N8J0 262 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 ZBTB38Q8NAP3 1195 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-204ENST00000463622 KCNJ15Q99712 375 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 ARHGEF4Q9NR80 690 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 IGSF5Q9NSI5 407 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 FZD1Q9UP38 647 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 XDHP47989 1333 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 MYO3BQ8WXR4 1341 aa4.49□□□□□ -1.69
SCFD1-204ENST00000463622 SLC27A2O14975 620 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 DGKIO75912 1065 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 HSP90B1P14625 803 aaKnown RBP4.48□□□□□ -1.69
SCFD1-204ENST00000463622 PRMT2P55345 433 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 NKX3-2P78367 333 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 HSP90AA2PQ14568 343 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-204ENST00000463622 NTRK3Q16288 839 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 SUPT20HL1Q3ZLR7 823 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 ZKSCAN2Q63HK3 967 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 PIP4K2CQ8TBX8 421 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 BRI3BPQ8WY22 251 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 TOE1Q96GM8 510 aaKnown RBP4.48□□□□□ -1.69
SCFD1-204ENST00000463622 COA1Q9GZY4 146 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 MYOTQ9UBF9 498 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 DBF4Q9UBU7 674 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-204ENST00000463622 MAP3K2Q9Y2U5 619 aa4.48□□□□□ -1.69
SCFD1-204ENST00000463622 PPP2R3BQ9Y5P8 575 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms