RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 ANGEL2Q5VTE6 544 aaKnown RBP5.42□□□□□ -1.54
CSMD3-205ENST00000462254 CWC27Q6UX04 472 aaKnown RBP5.42□□□□□ -1.54
CSMD3-205ENST00000462254 CCDC129Q6ZRS4 1044 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 BRAPQ7Z569 592 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 ZNF589Q86UQ0 364 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-205ENST00000462254 TSPYL5Q86VY4 417 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-205ENST00000462254 RTKN2Q8IZC4 609 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 GSTCDQ8NEC7 633 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 SUPT20HQ8NEM7 779 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 OR2W6PQ8NHA6 318 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 SLC7A14Q8TBB6 771 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 GJA10Q969M2 543 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 OSBP2Q969R2 916 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 DHRS1Q96LJ7 313 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 COA1Q9GZY4 146 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 AS3MTQ9HBK9 375 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 PLCB1Q9NQ66 1216 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 ZNF277Q9NRM2 450 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-205ENST00000462254 DIAPH3Q9NSV4 1193 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 GPATCH2Q9NW75 528 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 ABCF2Q9UG63 623 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 ADGRE2Q9UHX3 823 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 ANKRD6Q9Y2G4 727 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 MAST3O60307 1309 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 FAM205AQ6ZU69 1335 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 RAD50Q92878 1312 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 ZNF532Q9HCE3 1301 aa5.42□□□□□ -1.54
CSMD3-205ENST00000462254 SCN4AP35499 1836 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 GREB1LQ9C091 1923 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 ANKRD34BA5PLL1 514 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 HIP1O00291 1037 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 SHOXO15266 292 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 FOXP2O15409 715 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 RNF113AO15541 343 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 OPA1O60313 960 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 KPNA6O60684 536 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CAPNS1P04632 268 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 RNASE1P07998 156 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 ZFYP08048 801 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 C6orf222P0C671 652 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 PYGMP11217 842 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 PABPC1P11940 636 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 PDE6AP16499 860 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 YBX3P16989 372 aaKnown RBP eCLIP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 SERPINB3P29508 390 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CYP2C19P33261 490 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 IARSP41252 1262 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CASP2P42575 452 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 PPM1FP49593 454 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 GJA9P57773 515 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 MECOMQ03112 1051 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 PTH1RQ03431 593 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 GRB10Q13322 594 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 GTF2H3Q13889 308 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 COBLL1Q53SF7 1204 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 TMEM240Q5SV17 173 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 L1TD1Q5T7N2 865 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 SLC9C2Q5TAH2 1124 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 DCAF15Q66K64 600 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CCDC174Q6PII3 467 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CASC1Q6TDU7 716 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 ADGRA1Q86SQ6 560 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CREG2Q8IUH2 290 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CCDC144CPQ8IYA2 1237 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CERS5Q8N5B7 392 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 AGBL5Q8NDL9 886 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 ATXN2LQ8WWM7 1075 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 NSUN4Q96CB9 384 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 ORAI3Q9BRQ5 295 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 MXD3Q9BW11 206 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 LSG1Q9H089 658 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 TAOK3Q9H2K8 898 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 TRIT1Q9H3H1 467 aaKnown RBP5.41□□□□□ -1.54
CSMD3-205ENST00000462254 LRP2BPQ9P2M1 347 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 CCDC171Q6TFL3 1326 aa5.41□□□□□ -1.54
CSMD3-205ENST00000462254 SLC26A4O43511 780 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 TIMM44O43615 452 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 PRKD3O94806 890 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 SNUPNO95149 360 aaKnown RBP5.4□□□□□ -1.54
CSMD3-205ENST00000462254 PRAMEF1O95521 474 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 LDHCP07864 332 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 JMJD7P0C870 316 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 TYRP1P17643 537 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 HALP42357 657 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 SARSP49591 514 aaKnown RBP5.4□□□□□ -1.54
CSMD3-205ENST00000462254 GABREP78334 506 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 MAP3K12Q12852 859 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 SIM2Q14190 667 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-205ENST00000462254 ZNF460Q14592 562 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 UBE3CQ15386 1083 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 ABCB5Q2M3G0 1257 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 MCMDC2Q4G0Z9 681 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 MFSD14BQ5SR56 506 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 DACT2Q5SW24 774 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 GPR158Q5T848 1215 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 VPS53Q5VIR6 699 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 TTLL5Q6EMB2 1281 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 SLC23A3Q6PIS1 610 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 NSMFQ6X4W1 530 aa5.4□□□□□ -1.54
CSMD3-205ENST00000462254 CBLL1Q75N03 491 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms