RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 MAP9Q49MG5 647 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 GPR135Q8IZ08 494 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 CPA6Q8N4T0 437 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 RIN2Q8WYP3 895 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 C20orf173Q96LM9 149 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 CAMKK2Q96RR4 588 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 LMF1Q96S06 567 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 RPS6KC1Q96S38 1066 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 DPYSL5Q9BPU6 564 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 DMRT3Q9NQL9 472 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 ING3Q9NXR8 418 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 MRFAP1Q9Y605 127 aa5.77□□□□□ -1.49
HMGB1P48-201ENST00000446155 CR2P20023 1033 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 RAB27AP51159 221 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 MGAT2Q10469 447 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 RIN1Q13671 783 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 UBE4AQ14139 1066 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 MST1LQ2TV78 715 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 FBLN7Q53RD9 439 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 MUM1L1Q5H9M0 696 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 PNMA8AQ86V59 439 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 ANKRD53Q8N9V6 530 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 GPR156Q8NFN8 814 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 RHOBTB2Q9BYZ6 727 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 CDH19Q9H159 772 aa5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 PUF60Q9UHX1 559 aaKnown RBP5.76□□□□□ -1.49
HMGB1P48-201ENST00000446155 RPTORQ8N122 1335 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 E2F8A0AVK6 867 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 GPR42O15529 346 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 PLIN1O60240 522 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 CAND2O75155 1236 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 SNUPNO95149 360 aaKnown RBP5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 SCGB1D2O95969 90 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 ADKP55263 362 aaKnown RBP5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 SEPT2Q15019 361 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 ACAP2Q15057 778 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 LRRC41Q15345 812 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 UBXN11Q5T124 520 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 EFCAB2Q5VUJ9 269 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 TMED8Q6PL24 325 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 Q6ZVL8 140 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 SHCBP1Q8NEM2 672 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 OR2I1PQ8NGU4 316 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 LRRC37BQ96QE4 947 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 AASDHPPTQ9NRN7 309 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 RBM12Q9NTZ6 932 aaKnown RBP5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 SERPINB13Q9UIV8 391 aa5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 LUC7L2Q9Y383 392 aaKnown RBP5.75□□□□□ -1.49
HMGB1P48-201ENST00000446155 PRAMEF4O60810 478 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 ITGB3P05106 788 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 EDNRBP24530 442 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 THEMISQ8N1K5 641 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 DNERQ8NFT8 737 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 COA7Q96BR5 231 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 RPL10LQ96L21 214 aaKnown RBP5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 GNRHR2Q96P88 292 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 PLA2G12BQ9BX93 195 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 IL23AQ9NPF7 189 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 TLR9Q9NR96 1032 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 TRPS1Q9UHF7 1281 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 GIT1Q9Y2X7 761 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 IPPQ9Y573 584 aa5.74□□□□□ -1.49
HMGB1P48-201ENST00000446155 NRP1O14786 923 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 CREB3O43889 395 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 PHF2O75151 1096 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 KRT18P05783 430 aaKnown RBP5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 ATF3P18847 181 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 CCND1P24385 295 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 SLC6A9P48067 706 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 GJC2Q5T442 439 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 TCTN3Q6NUS6 607 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 CMTM4Q8IZR5 234 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 ZNF480Q8WV37 535 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 NRG4Q8WWG1 115 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 NUP88Q99567 741 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 NELFAQ9H3P2 528 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 BCO1Q9HAY6 547 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 PRDM16Q9HAZ2 1276 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 SIK3Q9Y2K2 1263 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 SLC30A1Q9Y6M5 507 aa5.73□□□□□ -1.49
HMGB1P48-201ENST00000446155 PATE3B3GLJ2 98 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 HTRA2O43464 458 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 AKR1B10O60218 316 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 CDC14BO60729 498 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 RFPL1O75677 317 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 RAD17O75943 681 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 GASTP01350 101 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 GSPT1P15170 499 aaKnown RBP5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 CRHR1P34998 444 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 TSHZ1Q6ZSZ6 1077 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 LIMS2Q7Z4I7 341 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 TAX1BP1Q86VP1 789 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 CHPFQ8IZ52 775 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 MYO1HQ8N1T3 1032 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 PPM1NQ8N819 430 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 OR7D4Q8NG98 312 aa5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB1P48-201ENST00000446155 CXorf38Q8TB03 319 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms