RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SSBP05455 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
COL17A1-204ENST00000433822 PLEKP08567 350 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-204ENST00000433822 CCDC172P0C7W6 258 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 UCHL3P15374 230 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 FERP16591 822 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 ZNF76P36508 570 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 APBA1Q02410 837 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 USP4Q13107 963 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 IKQ13123 557 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-204ENST00000433822 DOC2BQ14184 412 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 LRRC41Q15345 812 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 DLGAP5Q15398 846 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 TUBB8Q3ZCM7 444 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 TDRD12Q587J7 1177 aaKnown RBP8.11□□□□□ -1.11
COL17A1-204ENST00000433822 HSP90B2PQ58FF3 399 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 MUM1L1Q5H9M0 696 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 KLHDC7AQ5VTJ3 777 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 LRCH2Q5VUJ6 765 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 XRRA1Q6P2D8 792 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 CCNI2Q6ZMN8 369 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-204ENST00000433822 VPS36Q86VN1 386 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 NLRP8Q86W28 1048 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 MCF2L2Q86YR7 1114 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 OGFOD1Q8N543 542 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 GLIS3Q8NEA6 775 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 SPATA4Q8NEY3 305 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 C1orf216Q8TAB5 229 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 COG1Q8WTW3 980 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 CAVIN3Q969G5 261 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 TLR10Q9BXR5 811 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 ZCCHC2Q9C0B9 1178 aaKnown RBP8.11□□□□□ -1.11
COL17A1-204ENST00000433822 PARVGQ9HBI0 331 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 DMAC2Q9NW81 257 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 ZNF70Q9UC06 446 aaPredicted RBP8.11□□□□□ -1.11
COL17A1-204ENST00000433822 PGAP2Q9UHJ9 254 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 DBR1Q9UK59 544 aaKnown RBP8.11□□□□□ -1.11
COL17A1-204ENST00000433822 CAPN6Q9Y6Q1 641 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 FER1L6Q2WGJ9 1857 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 MACROD2A1Z1Q3 448 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 GLTPD2A6NH11 291 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 WDR46O15213 610 aaKnown RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 NKRFO15226 690 aaKnown RBP eCLIP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 N4BP1O75113 896 aaKnown RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 FLOT1O75955 427 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 SLITRK3O94933 977 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 FAM13AO94988 1023 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 ICAM1P05362 532 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 SCP2P22307 547 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 ITGB7P26010 798 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 PON1P27169 355 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 ADH6P28332 368 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 CHRNA5P30532 468 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 HOXD13P35453 343 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 PSMC2P35998 433 aaKnown RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 CAP2P40123 477 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 STAT3P40763 770 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 CACNB3P54284 484 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 EPHB4P54760 987 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 JAM2P57087 298 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 POLR2FP61218 127 aaKnown RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 JAG1P78504 1218 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 CYP27A1Q02318 531 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 KLHL30Q0D2K2 578 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 PABPC4Q13310 644 aaKnown RBP eCLIP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 RRP1BQ14684 758 aaKnown RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 TCEAL1Q15170 157 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 TLR1Q15399 786 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 CLUL1Q15846 466 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 CFAP221Q4G0U5 840 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 MEI1Q5TIA1 1274 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 ZNF771Q7L3S4 317 aaPredicted RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 HS2ST1Q7LGA3 356 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 IRF2BP2Q7Z5L9 587 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 MREGQ8N565 214 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 TTLL6Q8N841 843 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 C1orf131Q8NDD1 294 aaKnown RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 RDM1Q8NG50 284 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 CAGE1Q8TC20 777 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 SMCR8Q8TEV9 937 aaPredicted RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 LMBR1Q8WVP7 490 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 KCNN1Q92952 543 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 SLC35C1Q96A29 364 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 HVCN1Q96D96 273 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 PBKQ96KB5 322 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 FIZ1Q96SL8 496 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 MXRA8Q9BRK3 442 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 TEKT3Q9BXF9 490 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 FGFBP2Q9BYJ0 223 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 EPC1Q9H2F5 836 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 BHMT2Q9H2M3 363 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 ZSWIM4Q9H7M6 989 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 JADE2Q9NQC1 790 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 AVENQ9NQS1 362 aaPredicted RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 DNAAF2Q9NVR5 837 aaKnown RBP8.1□□□□□ -1.11
COL17A1-204ENST00000433822 CALCOCO1Q9P1Z2 691 aa8.1□□□□□ -1.11
COL17A1-204ENST00000433822 PCDHAC2Q9Y5I4 1007 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms