RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 RBAK-RBAKDNI3L0D1 243 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 TOM1L1O75674 476 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 PPP1R37O75864 691 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 NPTXRO95502 500 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 STAG3L1P0CL83 205 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 SARSP49591 514 aaKnown RBP16.6■□□□□ 0.25
VARS2-203ENST00000428017 DCAF4L1Q3SXM0 396 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 ZNF568Q3ZCX4 644 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 MPZL3Q6UWV2 235 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
VARS2-203ENST00000428017 RTN4RL1Q86UN2 441 aaPredicted RBP16.6■□□□□ 0.25
VARS2-203ENST00000428017 CDR2LQ86X02 465 aaPredicted RBP16.6■□□□□ 0.25
VARS2-203ENST00000428017 TDHQ8IZJ6 230 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 RNF169Q8NCN4 708 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 LINC01599Q8WXQ3 324 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 SLC9A7Q96T83 725 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 STRA6Q9BX79 667 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 FGFBP2Q9BYJ0 223 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 PDZD7Q9H5P4 517 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 FAM105AQ9NUU6 356 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 CXXC1Q9P0U4 656 aaPredicted RBP16.6■□□□□ 0.25
VARS2-203ENST00000428017 PCDHB7Q9Y5E2 793 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 PCDHB2Q9Y5E7 798 aa16.6■□□□□ 0.25
VARS2-203ENST00000428017 A0A0U1RQF3 1178 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.59■□□□□ 0.25
VARS2-203ENST00000428017 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 C9IYK1 514 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 CLDN3O15551 220 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 UPP2O95045 317 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 EDN1P05305 212 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 ATP2A2P16615 1042 aaKnown RBP16.59■□□□□ 0.25
VARS2-203ENST00000428017 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
VARS2-203ENST00000428017 CCDC183Q5T5S1 534 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 ZNF658Q5TYW1 1059 aaPredicted RBP16.59■□□□□ 0.25
VARS2-203ENST00000428017 SLFN12LQ6IEE8 588 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 EPM2AIP1Q7L775 607 aaPredicted RBP16.59■□□□□ 0.25
VARS2-203ENST00000428017 HS2ST1Q7LGA3 356 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 ZBTB33Q86T24 672 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 NPAS4Q8IUM7 802 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 NELFCDQ8IXH7 590 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 GLIS3Q8NEA6 775 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 SPATA20Q8TB22 786 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 PHOSPHO2Q8TCD6 241 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 ZNF507Q8TCN5 953 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 PGBD4Q96DM1 585 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 ZBED2Q9BTP6 218 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 TRAIPQ9BWF2 469 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 KIAA1468Q9P260 1216 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 MAN1B1Q9UKM7 699 aa16.59■□□□□ 0.25
VARS2-203ENST00000428017 BIN1O00499 593 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 PIGRP01833 764 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 HARSP12081 509 aaKnown RBP16.58■□□□□ 0.24
VARS2-203ENST00000428017 DEFB103AP81534 67 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 KCNA1Q09470 495 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 STIM1Q13586 685 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 ISM2Q6H9L7 571 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 ECHDC2Q86YB7 292 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 TRIML1Q8N9V2 468 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 KIAA0895Q8NCT3 520 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 SCFD1Q8WVM8 642 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 EIF2AQ9BY44 585 aaKnown RBP16.58■□□□□ 0.24
VARS2-203ENST00000428017 GBP3Q9H0R5 595 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 ELAC1Q9H777 363 aaKnown RBP16.58■□□□□ 0.24
VARS2-203ENST00000428017 TMEM161AQ9NX61 479 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 GDAQ9Y2T3 454 aa16.58■□□□□ 0.24
VARS2-203ENST00000428017 SCN5AQ14524 2016 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 SIP14410 1827 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 HOXA2O43364 376 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 ZNF623O75123 536 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 EOMESO95936 686 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 MCF2P10911 925 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 FAM189BP81408 668 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 NOLC1Q14978 699 aaKnown RBP eCLIP16.57■□□□□ 0.24
VARS2-203ENST00000428017 KNOP1Q1ED39 458 aaKnown RBP16.57■□□□□ 0.24
VARS2-203ENST00000428017 BMT2Q1RMZ1 405 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 UBXN11Q5T124 520 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 RASIP1Q5U651 963 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 EEF1DP3Q658K8 133 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 FAM117BQ6P1L5 589 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 ABI1Q8IZP0 508 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 GOLGA5Q8TBA6 731 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 TOP1MTQ969P6 601 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 MSTO1Q9BUK6 570 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 APOL6Q9BWW8 343 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 CDT1Q9H211 546 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 MAPK8IP1Q9UQF2 711 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 IPPQ9Y573 584 aa16.57■□□□□ 0.24
VARS2-203ENST00000428017 ITGA4P13612 1032 aa16.56■□□□□ 0.24
VARS2-203ENST00000428017 PROZP22891 400 aa16.56■□□□□ 0.24
VARS2-203ENST00000428017 PPP1R2P41236 205 aa16.56■□□□□ 0.24
VARS2-203ENST00000428017 MCL1Q07820 350 aa16.56■□□□□ 0.24
VARS2-203ENST00000428017 CAVIN1Q6NZI2 390 aaKnown RBP16.56■□□□□ 0.24
VARS2-203ENST00000428017 HERC6Q8IVU3 1022 aa16.56■□□□□ 0.24
VARS2-203ENST00000428017 GUF1Q8N442 669 aaKnown RBP16.56■□□□□ 0.24
VARS2-203ENST00000428017 POMGNT1Q8WZA1 660 aa16.56■□□□□ 0.24
VARS2-203ENST00000428017 ZBTB45Q96K62 511 aaPredicted RBP16.56■□□□□ 0.24
VARS2-203ENST00000428017 CCDC94Q9BW85 323 aaPredicted RBP16.56■□□□□ 0.24
VARS2-203ENST00000428017 PTPRHQ9HD43 1115 aa16.56■□□□□ 0.24
VARS2-203ENST00000428017 UBN1Q9NPG3 1134 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms