RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
CDRT15-201ENST00000420162 TARS2Q9BW92 718 aaKnown RBP16.6■□□□□ 0.25
CDRT15-201ENST00000420162 KIAA1468Q9P260 1216 aa16.6■□□□□ 0.25
CDRT15-201ENST00000420162 SLC4A7Q9Y6M7 1214 aa16.6■□□□□ 0.25
CDRT15-201ENST00000420162 UBE4BO95155 1302 aa16.6■□□□□ 0.25
CDRT15-201ENST00000420162 TTC3P53804 2025 aa16.6■□□□□ 0.25
CDRT15-201ENST00000420162 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 C9IYK1 514 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 HNRNPDLO14979 420 aaKnown RBP16.59■□□□□ 0.25
CDRT15-201ENST00000420162 ZNF623O75123 536 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 TOM1L1O75674 476 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 LIG4P49917 911 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 BMT2Q1RMZ1 405 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 C9orf50Q5SZB4 431 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 PRPF38BQ5VTL8 546 aaKnown RBP16.59■□□□□ 0.25
CDRT15-201ENST00000420162 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 SYCP3Q8IZU3 236 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 LINC01599Q8WXQ3 324 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 ERCC4Q92889 916 aaPredicted RBP16.59■□□□□ 0.25
CDRT15-201ENST00000420162 TCHPQ9BT92 498 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 PRO3102Q9H379 93 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 PDZD7Q9H5P4 517 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 ELAC1Q9H777 363 aaKnown RBP16.59■□□□□ 0.25
CDRT15-201ENST00000420162 PTPRHQ9HD43 1115 aa16.59■□□□□ 0.25
CDRT15-201ENST00000420162 CXXC1Q9P0U4 656 aaPredicted RBP16.59■□□□□ 0.25
CDRT15-201ENST00000420162 PRPF6O94906 941 aaKnown RBP16.58■□□□□ 0.24
CDRT15-201ENST00000420162 EOMESO95936 686 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 EDN1P05305 212 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 STAG3L1P0CL83 205 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 SKOR2Q2VWA4 1001 aaPredicted RBP16.58■□□□□ 0.24
CDRT15-201ENST00000420162 DCAF4L1Q3SXM0 396 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 UBXN11Q5T124 520 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.24
CDRT15-201ENST00000420162 SLFN12LQ6IEE8 588 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDRT15-201ENST00000420162 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 TDHQ8IZJ6 230 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 MYOCDQ8IZQ8 938 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 TRIML1Q8N9V2 468 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 KIAA0895Q8NCT3 520 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 SCFD1Q8WVM8 642 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 SLC9A7Q96T83 725 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 FGFBP2Q9BYJ0 223 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 TRIM6Q9C030 488 aaPredicted RBP16.58■□□□□ 0.24
CDRT15-201ENST00000420162 FAM105AQ9NUU6 356 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 USP20Q9Y2K6 914 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 PCDHB7Q9Y5E2 793 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 PCDHB2Q9Y5E7 798 aa16.58■□□□□ 0.24
CDRT15-201ENST00000420162 A0A1W2PPC1 479 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 CLDN3O15551 220 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 MCF2P10911 925 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 PROZP22891 400 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 SNRPFP62306 86 aaKnown RBP16.57■□□□□ 0.24
CDRT15-201ENST00000420162 KCNA1Q09470 495 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 MPZL3Q6UWV2 235 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 MRPL10Q7Z7H8 261 aaKnown RBP16.57■□□□□ 0.24
CDRT15-201ENST00000420162 ECHDC2Q86YB7 292 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 NPAS4Q8IUM7 802 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 GLIS3Q8NEA6 775 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 TOP1MTQ969P6 601 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 SYAP1Q96A49 352 aaPredicted RBP16.57■□□□□ 0.24
CDRT15-201ENST00000420162 PGBD4Q96DM1 585 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 TMEM161AQ9NX61 479 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 MAN1B1Q9UKM7 699 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 LRFN2Q9ULH4 789 aa16.57■□□□□ 0.24
CDRT15-201ENST00000420162 NPTXRO95502 500 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 ATP2A2P16615 1042 aaKnown RBP16.56■□□□□ 0.24
CDRT15-201ENST00000420162 HOXD13P35453 343 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 MCL1Q07820 350 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 MORC3Q14149 939 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 KNOP1Q1ED39 458 aaKnown RBP16.56■□□□□ 0.24
CDRT15-201ENST00000420162 ZNF568Q3ZCX4 644 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 COBLL1Q53SF7 1204 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 CCDC183Q5T5S1 534 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 EEF1DP3Q658K8 133 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 CDR2LQ86X02 465 aaPredicted RBP16.56■□□□□ 0.24
CDRT15-201ENST00000420162 CRIPAKQ8N1N5 446 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 GUF1Q8N442 669 aaKnown RBP16.56■□□□□ 0.24
CDRT15-201ENST00000420162 GOLGA5Q8TBA6 731 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 EIF2AQ9BY44 585 aaKnown RBP16.56■□□□□ 0.24
CDRT15-201ENST00000420162 GBP3Q9H0R5 595 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 CGNQ9P2M7 1197 aaKnown RBP16.56■□□□□ 0.24
CDRT15-201ENST00000420162 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
CDRT15-201ENST00000420162 RBAK-RBAKDNI3L0D1 243 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 ABLIM1O14639 778 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 HOXA2O43364 376 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 PPP1R2P41236 205 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 MATR3P43243 847 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDRT15-201ENST00000420162 DEFB103AP81534 67 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 STIM1Q13586 685 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 NOLC1Q14978 699 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDRT15-201ENST00000420162 KYAT1Q16773 422 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 HS2ST1Q7LGA3 356 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 ZNF598Q86UK7 904 aaKnown RBP16.55■□□□□ 0.24
CDRT15-201ENST00000420162 RSPH1Q8WYR4 309 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 ZBTB45Q96K62 511 aaPredicted RBP16.55■□□□□ 0.24
CDRT15-201ENST00000420162 CDT1Q9H211 546 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 UBN1Q9NPG3 1134 aa16.55■□□□□ 0.24
CDRT15-201ENST00000420162 ANKFY1Q9P2R3 1169 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms