RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SRGAP2CP0DJJ0 459 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 MNX1P50219 401 aaPredicted RBP15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 CRYBB1P53674 252 aaPredicted RBP15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 MCL1Q07820 350 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 VWA3BQ502W6 1294 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 ARMCX5Q6P1M9 558 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 INTS8Q75QN2 995 aaKnown RBP15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 RSPH3Q86UC2 560 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 VSTM4Q8IW00 320 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 IQCDQ96DY2 449 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 ERGIC2Q96RQ1 377 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 GCOM2Q9BZD3 368 aaPredicted RBP15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 HSPBP1Q9NZL4 362 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 TNFSF13BQ9Y275 285 aa15.58■□□□□ 0.08
SHMT1P1-201ENST00000419974 CNTNAP2Q9UHC6 1331 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 A0A087WZ62 844 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 GTPBP10A4D1E9 387 aaKnown RBP15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 ANKRD63C9JTQ0 380 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 H0YGN5 161 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 N4BP3O15049 544 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 PRKCBP05771 671 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 EIF4BP23588 611 aaKnown RBP15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 AXLP30530 894 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 DEKP35659 375 aaKnown RBP15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 LIG4P49917 911 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 NLRP11P59045 1033 aaKnown RBP15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 CLDN10P78369 228 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 RBL2Q08999 1139 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 PTK7Q13308 1070 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 KYAT1Q16773 422 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 HS1BP3Q53T59 392 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 C1orf53Q5VUE5 145 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 GDF6Q6KF10 455 aaPredicted RBP15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 RUFY4Q6ZNE9 571 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 FAM186BQ8IYM0 893 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 TMC2Q8TDI7 906 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 MFSD14AQ96MC6 490 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 NLRP4Q96MN2 994 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 FDXACB1Q9BRP7 624 aaPredicted RBP15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 CBWD1Q9BRT8 395 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 NOC4LQ9BVI4 516 aaKnown RBP15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 NDST4Q9H3R1 872 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 SQORQ9Y6N5 450 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 DNAH12Q6ZR08 3092 aa15.57■□□□□ 0.08
SHMT1P1-201ENST00000419974 A0A0U1RQG5 324 aaPredicted RBP15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 A0A1B0GUA9 196 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 A0A1W2PQ45 241 aaPredicted RBP15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 A0A1W2PQY0 241 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 KBTBD13C9JR72 458 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 CLIC2O15247 247 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 EXTL3O43909 919 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 FAM189A1O60320 539 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 EXOC3O60645 756 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 VTNP04004 478 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 DARSP14868 501 aaKnown RBP15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 MTIF2P46199 727 aaKnown RBP15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 CDK7P50613 346 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 FIGNQ5HY92 759 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 HABP4Q5JVS0 413 aaKnown RBP15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 FAM26DQ5JW98 314 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 SPECC1LQ69YQ0 1117 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 SMYD5Q6GMV2 418 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 USP37Q86T82 979 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 GPD1LQ8N335 351 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 DNAJB3Q8WWF6 145 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 SLC35C1Q96A29 364 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 ZBTB10Q96DT7 871 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 MINDY3Q9H8M7 445 aa15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHMT1P1-201ENST00000419974 GOLGA6L6A8MZA4 724 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 ARVCFO00192 962 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 P4HA2O15460 535 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 CLDN3O15551 220 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 EVI5O60447 810 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 EDN1P05305 212 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 IQCF3P0C7M6 154 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 GTF2H1P32780 548 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 CASP4P49662 377 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 BFSP1Q12934 665 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 TBX2Q13207 712 aaPredicted RBP15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 PRPF4BQ13523 1007 aaKnown RBP15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 CCDC40Q4G0X9 1142 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 MPZL3Q6UWV2 235 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 NLRP7Q8WX94 980 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 POMGNT1Q8WZA1 660 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 BICD1Q96G01 975 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 TARS2Q9BW92 718 aaKnown RBP15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 IKZF4Q9H2S9 585 aa15.55■□□□□ 0.08
SHMT1P1-201ENST00000419974 FRMPD3Q5JV73 1810 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 INO80B-WBP1J3KQ70 363 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 TEX33O43247 280 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 COL6A1P12109 1028 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 SFPQP23246 707 aaKnown RBP eCLIP15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 ZNF200P98182 395 aaPredicted RBP15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 MGAT3Q09327 533 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 TRIM14Q14142 442 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 SNRNP35Q16560 246 aaKnown RBP15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 HSP90AA4PQ58FG1 418 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 ATF7IP2Q5U623 682 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms