RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 MTIF2P46199 727 aaKnown RBP18.4■□□□□ 0.54
SSB-202ENST00000409333 GJA8P48165 433 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 COPB1P53618 953 aaKnown RBP18.4■□□□□ 0.54
SSB-202ENST00000409333 PTK7Q13308 1070 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 MYBPC2Q14324 1141 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 SNX17Q15036 470 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 RSPH3Q86UC2 560 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 ANKRD20A12PQ8NF67 263 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 SENP6Q9GZR1 1112 aaPredicted RBP18.4■□□□□ 0.54
SSB-202ENST00000409333 VPS16Q9H269 839 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 INTS13Q9NVM9 706 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 CDY2AQ9Y6F7 541 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 TANC1Q9C0D5 1861 aa18.4■□□□□ 0.54
SSB-202ENST00000409333 CNTNAP2Q9UHC6 1331 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 GOLGA8IPA6NC78 632 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 LRRC10BA6NIK2 292 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 GOLGA8JA6NMD2 632 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 TSPAN1O60635 241 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 EPB41P11171 864 aaKnown RBP18.39■□□□□ 0.53
SSB-202ENST00000409333 DARSP14868 501 aaKnown RBP18.39■□□□□ 0.53
SSB-202ENST00000409333 GARTP22102 1010 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 EIF4BP23588 611 aaKnown RBP18.39■□□□□ 0.53
SSB-202ENST00000409333 THPOP40225 353 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 MARSP56192 900 aaKnown RBP18.39■□□□□ 0.53
SSB-202ENST00000409333 ATF7IP2Q5U623 682 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 TSHZ1Q6ZSZ6 1077 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 RPAINQ86UA6 219 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 CDR2LQ86X02 465 aaPredicted RBP18.39■□□□□ 0.53
SSB-202ENST00000409333 XXYLT1Q8NBI6 393 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 RDH13Q8NBN7 331 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 DIS3LQ8TF46 1054 aaKnown RBP18.39■□□□□ 0.53
SSB-202ENST00000409333 PRIMPOLQ96LW4 560 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 TUBGCP2Q9BSJ2 902 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 CELF4Q9BZC1 486 aaKnown RBP18.39■□□□□ 0.53
SSB-202ENST00000409333 MCOLN1Q9GZU1 580 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 FRMD4BQ9Y2L6 1034 aa18.39■□□□□ 0.53
SSB-202ENST00000409333 A0A1B0GTH6 734 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 M0QZ92 97 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 ABLIM1O14639 778 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 TOM1L1O75674 476 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 ERLIN2O94905 339 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 PRKCSHP14314 528 aaPredicted RBP18.38■□□□□ 0.53
SSB-202ENST00000409333 PSMC2P35998 433 aaKnown RBP18.38■□□□□ 0.53
SSB-202ENST00000409333 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.53
SSB-202ENST00000409333 CDK7P50613 346 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 CRYBB1P53674 252 aaPredicted RBP18.38■□□□□ 0.53
SSB-202ENST00000409333 PTPN21Q16825 1174 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 TMEM132AQ24JP5 1023 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 MIIPQ5JXC2 388 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 FAM186BQ8IYM0 893 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 ANP32BQ92688 251 aaKnown RBP18.38■□□□□ 0.53
SSB-202ENST00000409333 CPB2Q96IY4 423 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 TRPV2Q9Y5S1 764 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 MKI67P46013 3256 aaKnown RBP18.38■□□□□ 0.53
SSB-202ENST00000409333 SCN5AQ14524 2016 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 RALGAPA2Q2PPJ7 1873 aa18.38■□□□□ 0.53
SSB-202ENST00000409333 CHRNA1P02708 482 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 ARF4P18085 180 aaPredicted RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 PROZP22891 400 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 MGAT3Q09327 533 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 TRIM71Q2Q1W2 868 aaKnown RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 EEF1DP3Q658K8 133 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 SLFN12LQ6IEE8 588 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 FRMD5Q7Z6J6 570 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 ZBTB33Q86T24 672 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 CBWD2Q8IUF1 395 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 TRIM59Q8IWR1 403 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 BORCS6Q96GS4 357 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 MKNK1Q9BUB5 465 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 NOC4LQ9BVI4 516 aaKnown RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 PTPRHQ9HD43 1115 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 AGO2Q9UKV8 859 aaKnown RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 A0A0B4J269 797 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 N4BP3O15049 544 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 CLDN3O15551 220 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 TEX33O43247 280 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 RPLP2P05387 115 aaKnown RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 ADRB2P07550 413 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 HARSP12081 509 aaKnown RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 ATN1P54259 1190 aaPredicted RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 MAN2A1Q16706 1144 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 MPZL3Q6UWV2 235 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 CATSPER4Q7RTX7 472 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 FAM126BQ8IXS8 530 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 ZNF710Q8N1W2 664 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 GPD1LQ8N335 351 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 MRFAP1L1Q96HT8 127 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 FBXL18Q96ME1 805 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 MSTO1Q9BUK6 570 aa18.37■□□□□ 0.53
SSB-202ENST00000409333 RTN4Q9NQC3 1192 aaKnown RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 ARMCX3Q9UH62 379 aaPredicted RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 PDCD11Q14690 1871 aaKnown RBP18.37■□□□□ 0.53
SSB-202ENST00000409333 CBFA2T2O43439 604 aa18.36■□□□□ 0.53
SSB-202ENST00000409333 COL6A1P12109 1028 aa18.36■□□□□ 0.53
SSB-202ENST00000409333 SFPQP23246 707 aaKnown RBP eCLIP18.36■□□□□ 0.53
SSB-202ENST00000409333 NR1I3Q14994 352 aa18.36■□□□□ 0.53
SSB-202ENST00000409333 SNRNP35Q16560 246 aaKnown RBP18.36■□□□□ 0.53
SSB-202ENST00000409333 ZNF568Q3ZCX4 644 aa18.36■□□□□ 0.53
SSB-202ENST00000409333 ZBTB41Q5SVQ8 909 aa18.36■□□□□ 0.53
SSB-202ENST00000409333 TCHPQ9BT92 498 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms