RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 NEK9Q8TD19 979 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 FDXACB1Q9BRP7 624 aaPredicted RBP13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 C11orf84Q9BUA3 381 aaPredicted RBP13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 TMEM60Q9H2L4 133 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 ATP6V0A4Q9HBG4 840 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 TMEM161AQ9NX61 479 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 PGPEP1Q9NXJ5 209 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 COG5Q9UP83 839 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 KIF3AQ9Y496 699 aa13.14□□□□□ -0.31
SMIM11A-201ENST00000399292 MYH9P35579 1960 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 CSDE1O75534 798 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 LINC00271P0C7V0 271 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 TRAPPC10P48553 1259 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 ORC2Q13416 577 aaPredicted RBP13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 ZNF174Q15697 407 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 FAM102BQ5T8I3 360 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 ZBTB33Q86T24 672 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 PRPF31Q8WWY3 499 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 TBC1D32Q96NH3 1257 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 KCTD15Q96SI1 283 aaPredicted RBP13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 DHX33Q9H6R0 707 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 ANKEF1Q9NU02 776 aa13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 NOL7Q9UMY1 257 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 MRPL42Q9Y6G3 142 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-201ENST00000399292 COL4A6Q14031 1691 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 SIP14410 1827 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 TBKBP1A7MCY6 615 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 GAS2O43903 313 aaKnown RBP13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 LYPLA2O95372 231 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 SRGAP2CP0DJJ0 459 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 FGFR4P22455 802 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 TECP42680 631 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 GATMP50440 423 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 TFF2Q03403 129 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 NAALADL2Q58DX5 795 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 SPOUT1Q5T280 376 aaKnown RBP13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 KSR1Q8IVT5 923 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 PSPC1Q8WXF1 523 aaKnown RBP13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 NLRP4Q96MN2 994 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 LMAN2LQ9H0V9 348 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 CHST12Q9NRB3 414 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 COL4A3BPQ9Y5P4 624 aa13.12□□□□□ -0.31
SMIM11A-201ENST00000399292 MUC3AQ02505 3323 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 A0A0U1RQF3 1178 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 ASAP2O43150 1006 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 AP1G2O75843 785 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 EOMESO95936 686 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 OR52Z1P0C646 297 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 SFPQP23246 707 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 LAMTOR4Q0VGL1 99 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 TIGD5Q53EQ6 642 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 TTC38Q5R3I4 469 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 Q6ZVU0 165 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 ECHDC2Q86YB7 292 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 P2RX5Q93086 422 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 ALG13Q9NP73 1137 aaKnown RBP13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 PLAGL2Q9UPG8 496 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 GPSM3Q9Y4H4 160 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 TTC3P53804 2025 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 EVPLQ92817 2033 aa13.11□□□□□ -0.31
SMIM11A-201ENST00000399292 GRM6O15303 877 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 FGFR1P11362 822 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 PTK2Q05397 1052 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 EMC2Q15006 297 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 SRGAP1Q7Z6B7 1085 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 ABI1Q8IZP0 508 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 RNF169Q8NCN4 708 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 ERMNQ8TAM6 284 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 OCSTAMPQ9BR26 566 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 TMEM117Q9H0C3 514 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 NSUN3Q9H649 340 aaKnown RBP13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 IFT122Q9HBG6 1241 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 TYW1Q9NV66 732 aaKnown RBP13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 PCDHB12Q9Y5F1 795 aa13.1□□□□□ -0.31
SMIM11A-201ENST00000399292 A0A087WWV3 80 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 BDP1A6H8Y1 2624 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 TTLL8A6PVC2 850 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 SPATA31C1P0DKV0 1188 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 SKIP12755 728 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 GJB2P29033 226 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 RARRES1P49788 294 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 DHX9Q08211 1270 aaKnown RBP13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 CBLBQ13191 982 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms