RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 GABPAQ06546 454 aa11.96□□□□□ -0.49
IFT140-202ENST00000397417 GPD1LQ8N335 351 aa11.96□□□□□ -0.49
IFT140-202ENST00000397417 OSBPL9Q96SU4 736 aa11.96□□□□□ -0.49
IFT140-202ENST00000397417 JPH2Q9BR39 696 aaPredicted RBP11.96□□□□□ -0.49
IFT140-202ENST00000397417 TSKSQ9UJT2 592 aa11.96□□□□□ -0.49
IFT140-202ENST00000397417 M0QYV0 167 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 FOXN3O00409 490 aaPredicted RBP11.96□□□□□ -0.5
IFT140-202ENST00000397417 FUT2Q10981 343 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 ECM1Q16610 540 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 BBS9Q3SYG4 887 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 KCTD6Q8NC69 237 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 AFG1LQ8WV93 481 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 PRPF31Q8WWY3 499 aaKnown RBP11.96□□□□□ -0.5
IFT140-202ENST00000397417 GMCL1Q96IK5 515 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 FGFBP2Q9BYJ0 223 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 DNAJC18Q9H819 358 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 GPBP1L1Q9HC44 474 aaPredicted RBP11.96□□□□□ -0.5
IFT140-202ENST00000397417 TUFT1Q9NNX1 390 aa11.96□□□□□ -0.5
IFT140-202ENST00000397417 SLITRK3O94933 977 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 MOCS2O96007 188 aaPredicted RBP11.95□□□□□ -0.5
IFT140-202ENST00000397417 HERVK_113P62684 666 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 VSNL1P62760 191 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 SMTNL2Q2TAL5 461 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 GPRC5AQ8NFJ5 357 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 TSNARE1Q96NA8 513 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 RAB17Q9H0T7 212 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 ADARB2Q9NS39 739 aaKnown RBP11.95□□□□□ -0.5
IFT140-202ENST00000397417 PLS3P13797 630 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 ATF2P15336 505 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 PTPRAP18433 802 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 PHKA2P46019 1235 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 GPC3P51654 580 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 BPIFB4P59827 614 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 CASP8Q14790 479 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 ZRSR2Q15696 482 aaKnown RBP11.95□□□□□ -0.5
IFT140-202ENST00000397417 KDELC2Q7Z4H8 507 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 FBF1Q8TES7 1133 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 COG1Q8WTW3 980 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 LRRC1Q9BTT6 524 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 MRPL4Q9BYD3 311 aaKnown RBP11.95□□□□□ -0.5
IFT140-202ENST00000397417 SIK2Q9H0K1 926 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 SLC38A10Q9HBR0 1119 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 SMYD2Q9NRG4 433 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 CEP290O15078 2479 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
IFT140-202ENST00000397417 RPS12P25398 132 aaKnown RBP11.95□□□□□ -0.5
IFT140-202ENST00000397417 NPTX2P47972 431 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 ZC3H18Q86VM9 953 aaKnown RBP11.95□□□□□ -0.5
IFT140-202ENST00000397417 ZNF564Q8TBZ8 553 aaPredicted RBP11.95□□□□□ -0.5
IFT140-202ENST00000397417 BCAS4Q8TDM0 211 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 HASPINQ8TF76 798 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 SPATC1LQ9H0A9 340 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 EHD4Q9H223 541 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 CAPN6Q9Y6Q1 641 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 A6NJR5 290 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 A8MXQ7 604 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 BRD3Q15059 726 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 UBA3Q8TBC4 463 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 CPB2Q96IY4 423 aa11.95□□□□□ -0.5
IFT140-202ENST00000397417 TADA3O75528 432 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 PSMC1P62191 440 aaKnown RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 YWHAEP62258 255 aaKnown RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 MYO1EQ12965 1108 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 SLFN12LQ6IEE8 588 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 MMS22LQ6ZRQ5 1243 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 ERO1BQ86YB8 467 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 PXMP2Q9NR77 195 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 ATP2A2P16615 1042 aaKnown RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 ITGB5P18084 799 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 CYP2C19P33261 490 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 SOX5P35711 763 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 NME3Q13232 169 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 NCOA4Q13772 614 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 B4GALNT4Q76KP1 1039 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 RSPH3Q86UC2 560 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 REXO1L1PQ8IX06 675 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 ARFGAP2Q8N6H7 521 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 TAS1R2Q8TE23 839 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 KAT5Q92993 513 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 WDR18Q9BV38 432 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 CELF4Q9BZC1 486 aaKnown RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 CREB3O43889 395 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 LCP1P13796 627 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 ATN1P54259 1190 aaPredicted RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 PGM5Q15124 567 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 CCDC6Q16204 474 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 FAM102AQ5T9C2 384 aaPredicted RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 CYP4A22Q5TCH4 519 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 RWDD4Q6NW29 188 aaKnown RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 RIT2Q99578 217 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 ASCC2Q9H1I8 757 aaPredicted RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 LRFN2Q9ULH4 789 aa11.94□□□□□ -0.5
IFT140-202ENST00000397417 AFDNP55196 1824 aaKnown RBP11.94□□□□□ -0.5
IFT140-202ENST00000397417 SLIT3O75094 1523 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 ZNF541Q9H0D2 1346 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 EPHB6O15197 1021 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 RNF40O75150 1001 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 ZRANB2O95218 330 aaKnown RBP eCLIP11.93□□□□□ -0.5
IFT140-202ENST00000397417 HLA-DRAP01903 254 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 CYP2C9P11712 490 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms