RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 FOXP1Q9H334 677 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 TUFT1Q9NNX1 390 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 KANSL3Q9P2N6 904 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 PIEZO1Q92508 2521 aa20.27■□□□□ 0.84
PDLIM7-205ENST00000393551 CARNS1A5YM72 827 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 F8W810 466 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 ALDH2P05091 517 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 WEE2P0C1S8 567 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 ITGA4P13612 1032 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 SP100P23497 879 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 MLH1P40692 756 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 ZXDAP98168 799 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 DSC1Q08554 894 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 SAFBQ15424 915 aaKnown RBP eCLIP20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 POTEGQ6S5H5 508 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 TRIM67Q6ZTA4 783 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 MAEAQ7L5Y9 396 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 COLGALT2Q8IYK4 626 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 C4orf32Q8N8J7 132 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 CNNM3Q8NE01 707 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 GSTCDQ8NEC7 633 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 CCDC51Q96ER9 411 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 POLR3CQ9BUI4 534 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 NXF3Q9H4D5 531 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 POMKQ9H5K3 350 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 DBR1Q9UK59 544 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 FAN1Q9Y2M0 1017 aa20.26■□□□□ 0.83
PDLIM7-205ENST00000393551 TTLL13PA6NNM8 815 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 OR52Z1P0C646 297 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 NBR1Q14596 966 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 ECM1Q16610 540 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 TPRNQ4KMQ1 711 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 TAS1R1Q7RTX1 841 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 BSNDQ8WZ55 320 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 UBN1Q9NPG3 1134 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 C2orf16Q68DN1 1984 aa20.25■□□□□ 0.83
PDLIM7-205ENST00000393551 DENND4AQ7Z401 1863 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 A0A1B0GUA9 196 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 SSBP05455 408 aaKnown RBP eCLIP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 CNPP09543 421 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 RPA1P27694 616 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 SCNN1GP51170 649 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 ITIH3Q06033 890 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 GIT2Q14161 759 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 BMS1Q14692 1282 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 RARS2Q5T160 578 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 NOSTRINQ8IVI9 506 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 RNF168Q8IYW5 571 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 ZSCAN31Q96LW9 406 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 CCDC43Q96MW1 224 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 KLHL5Q96PQ7 755 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 FAM193BQ96PV7 902 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 APOL6Q9BWW8 343 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 PRG3Q9Y2Y8 225 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 PLXNA3P51805 1871 aa20.24■□□□□ 0.83
PDLIM7-205ENST00000393551 TMEM221A6NGB7 291 aa20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 M0R296 226 aa20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 EDN1P05305 212 aa20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 AKAP5P24588 427 aa20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 HOXD11P31277 338 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 RBM25P49756 843 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 TOB1P50616 345 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 ORC2Q13416 577 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 TTC38Q5R3I4 469 aa20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 CDCA2Q69YH5 1023 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 BMP8AQ7Z5Y6 402 aa20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 NACC1Q96RE7 527 aa20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 FZD8Q9H461 694 aa20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 SH2B1Q9NRF2 756 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-205ENST00000393551 LRRIQ4A6NIV6 560 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 C2CD4DB7Z1M9 353 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 NPTXRO95502 500 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 SOD2P04179 222 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 CLCN4P51793 760 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 HMGN5P82970 282 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 NCBP1Q09161 790 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 CES5AQ6NT32 575 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 SLC27A1Q6PCB7 646 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 PADI6Q6TGC4 694 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 MCPH1Q8NEM0 835 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 ASIC4Q96FT7 647 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 FBXL18Q96ME1 805 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 POLD4Q9HCU8 107 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 USP20Q9Y2K6 914 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 GIT1Q9Y2X7 761 aa20.22■□□□□ 0.83
PDLIM7-205ENST00000393551 U2AF2P26368 475 aaKnown RBP eCLIP20.21■□□□□ 0.832e-9■■■□□ 16.8
PDLIM7-205ENST00000393551 OR1G1P47890 313 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 PTPN21Q16825 1174 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 KIAA1841Q6NSI8 718 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 PPP4R3CPQ6ZMV5 832 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 NECTIN4Q96NY8 510 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 CXCL16Q9H2A7 254 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 TSHZ2Q9NRE2 1034 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 DZANK1Q9NVP4 752 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 KLK14Q9P0G3 267 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 KMT2EQ8IZD2 1858 aa20.21■□□□□ 0.83
PDLIM7-205ENST00000393551 C2CD2LO14523 706 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 CYP11B2P19099 503 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 MTHFRP42898 656 aa20.2■□□□□ 0.82
PDLIM7-205ENST00000393551 TRAPPC10P48553 1259 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms