RNA–Protein interactions for RNA: ENST00000368864.8

RPF2-201, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 5

Gene RPF2, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-201ENST00000368864 USP53Q70EK8 1073 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 ZNF589Q86UQ0 364 aaPredicted RBP8.04□□□□□ -1.12
RPF2-201ENST00000368864 ZSWIM9Q86XI8 627 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 FAM151AQ8WW52 585 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 ZNF287Q9HBT7 754 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 ATP8A2Q9NTI2 1148 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 FAM53CQ9NYF3 392 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 ADGRE2Q9UHX3 823 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 CTNNA3Q9UI47 895 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 PTCH2Q9Y6C5 1203 aa8.04□□□□□ -1.12
RPF2-201ENST00000368864 RPAP1Q9BWH6 1393 aaPredicted RBP8.04□□□□□ -1.12
RPF2-201ENST00000368864 COL2A1P02458 1487 aaPredicted RBP8.04□□□□□ -1.12
RPF2-201ENST00000368864 POLR2AP24928 1970 aaKnown RBP8.04□□□□□ -1.12
RPF2-201ENST00000368864 DOCK1Q14185 1865 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.03□□□□□ -1.12
RPF2-201ENST00000368864 ZNF213O14771 459 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 PRKAB2O43741 272 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 HSPD1P10809 573 aaKnown RBP8.03□□□□□ -1.12
RPF2-201ENST00000368864 RHBDL3P58872 404 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 PRKG1Q13976 671 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 TCEA2Q15560 299 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 SUPT20HL1Q3ZLR7 823 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 HSF5Q4G112 596 aaPredicted RBP8.03□□□□□ -1.12
RPF2-201ENST00000368864 SLC35F1Q5T1Q4 408 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 ZPBP2Q6X784 338 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 FAM83AQ86UY5 434 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 IFNL3Q8IZI9 196 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 NUP43Q8NFH3 380 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 USP33Q8TEY7 942 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 FRS2Q8WU20 508 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 CDCA5Q96FF9 252 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 ASIC4Q96FT7 647 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 STRBPQ96SI9 672 aaKnown RBP8.03□□□□□ -1.12
RPF2-201ENST00000368864 ALG1Q9BT22 464 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 MCMBPQ9BTE3 642 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 IDI2Q9BXS1 227 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 GLIS2Q9BZE0 524 aaPredicted RBP8.03□□□□□ -1.12
RPF2-201ENST00000368864 TMEM39BQ9GZU3 492 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 DEFB129Q9H1M3 183 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 DHX36Q9H2U1 1008 aaKnown RBP8.03□□□□□ -1.12
RPF2-201ENST00000368864 PDLIM7Q9NR12 457 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 GPR27Q9NS67 375 aa8.03□□□□□ -1.12
RPF2-201ENST00000368864 MRPS23Q9Y3D9 190 aaKnown RBP8.03□□□□□ -1.12
RPF2-201ENST00000368864 OTOFQ9HC10 1997 aa8.02□□□□□ -1.12
RPF2-201ENST00000368864 PAPPA2Q9BXP8 1791 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 MPHOSPH10O00566 681 aaKnown RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 DLX3O60479 287 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 WDHD1O75717 1129 aaPredicted RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 TOMM70O94826 608 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 PNLIPP16233 465 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 ZKSCAN1P17029 563 aaPredicted RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 TRDNQ13061 729 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 VPS53Q5VIR6 699 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 FKBP1CQ5VVH2 108 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 RALYLQ86SE5 291 aaKnown RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 PTPRN2Q92932 1015 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 ZBED3Q96IU2 234 aaPredicted RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 LGR4Q9BXB1 951 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 MRPL4Q9BYD3 311 aaKnown RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 KRTAP9-2Q9BYQ4 174 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 TMX1Q9H3N1 280 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.02□□□□□ -1.13
RPF2-201ENST00000368864 DCP1AQ9NPI6 582 aaPredicted RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 DDX4Q9NQI0 724 aaKnown RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 PALD1Q9ULE6 856 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 COA3Q9Y2R0 106 aaPredicted RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 TIMM13Q9Y5L4 95 aaPredicted RBP8.02□□□□□ -1.13
RPF2-201ENST00000368864 ZMYM6O95789 1325 aa8.02□□□□□ -1.13
RPF2-201ENST00000368864 SIPA1L1O43166 1804 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 CNTNAP1P78357 1384 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 TLDC2A0PJX2 215 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 GSG1L2A8MUP6 293 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 ABLIM1O14639 778 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 GLI1P08151 1106 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 PRKCAP17252 672 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 HAND2P61296 217 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 CYP4F8P98187 520 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 PPARAQ07869 468 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 RRP12Q5JTH9 1297 aaKnown RBP8.01□□□□□ -1.13
RPF2-201ENST00000368864 PRAMEF18Q5VWM3 479 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 GIMAP6Q6P9H5 292 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 MPZL3Q6UWV2 235 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 ARMC9Q7Z3E5 817 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 LILRB2Q8N423 598 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 LZTR1Q8N653 840 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.01□□□□□ -1.13
RPF2-201ENST00000368864 ZNF341Q9BYN7 854 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 RNF41Q9H4P4 317 aaPredicted RBP8.01□□□□□ -1.13
RPF2-201ENST00000368864 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
RPF2-201ENST00000368864 TMEM260Q9NX78 707 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.01□□□□□ -1.13
RPF2-201ENST00000368864 IMPACTQ9P2X3 320 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 PI4KBQ9UBF8 816 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 SWAP70Q9UH65 585 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 SFMBT1Q9UHJ3 866 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 SERPINB13Q9UIV8 391 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 NUDT5Q9UKK9 219 aa8.01□□□□□ -1.13
RPF2-201ENST00000368864 RBM8AQ9Y5S9 174 aaKnown RBP8.01□□□□□ -1.13
RPF2-201ENST00000368864 ATRNL1Q5VV63 1379 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms