RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 MOV10L1Q9BXT6 1211 aaKnown RBP19.79■□□□□ 0.76
CLIP2-202ENST00000361545 KCNH7Q9NS40 1196 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 CNTNAP5Q8WYK1 1306 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 TADA2AO75478 443 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 SRGNP10124 158 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 GTF3C2Q8WUA4 911 aaPredicted RBP19.79■□□□□ 0.76
CLIP2-202ENST00000361545 VPS39Q96JC1 886 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 NRXN1Q9ULB1 1477 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 SUN1O94901 812 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 CYP2C9P11712 490 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 PPARGP37231 505 aaPredicted RBP19.78■□□□□ 0.76
CLIP2-202ENST00000361545 CAP2P40123 477 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 HDLBPQ00341 1268 aaKnown RBP19.78■□□□□ 0.76
CLIP2-202ENST00000361545 KCNB1Q14721 858 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 MAP3K21Q5TCX8 1036 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 ENOSF1Q7L5Y1 443 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 TTC13Q8NBP0 860 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 NCK2O43639 380 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 APOEP02649 317 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 PPP4CP60510 307 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 SREBF2Q12772 1141 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 SUDS3Q9H7L9 328 aaPredicted RBP19.78■□□□□ 0.76
CLIP2-202ENST00000361545 NOVA2Q9UNW9 492 aaKnown RBP19.78■□□□□ 0.76
CLIP2-202ENST00000361545 TRIM42Q8IWZ5 723 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 IP6K2Q9UHH9 426 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 TRAPPC3O43617 180 aa19.78■□□□□ 0.76
CLIP2-202ENST00000361545 ZC2HC1CQ53FD0 456 aaPredicted RBP19.78■□□□□ 0.76
CLIP2-202ENST00000361545 MAGEB2O15479 319 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 EFCAB12Q6NXP0 572 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 DHX38Q92620 1227 aaKnown RBP19.77■□□□□ 0.76
CLIP2-202ENST00000361545 TIPINQ9BVW5 301 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 CCDC188H7C350 402 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 MYBP10242 640 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 SPATA2LQ8IUW3 424 aaPredicted RBP19.77■□□□□ 0.76
CLIP2-202ENST00000361545 IL25Q9H293 177 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 PACSIN2Q9UNF0 486 aaPredicted RBP19.77■□□□□ 0.76
CLIP2-202ENST00000361545 CAPN7Q9Y6W3 813 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 AP1B1Q10567 949 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 NBPF9Q3BBW0 867 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 MYMKA6NI61 221 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 CA4P22748 312 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 CDC42EP1Q00587 391 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 TMEM132DQ14C87 1099 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 APPL2Q8NEU8 664 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 TMEM60Q9H2L4 133 aa19.77■□□□□ 0.76
CLIP2-202ENST00000361545 PAMP19021 973 aa19.77■□□□□ 0.75
CLIP2-202ENST00000361545 NPEPPSP55786 919 aa19.77■□□□□ 0.75
CLIP2-202ENST00000361545 BCAR1P56945 870 aa19.77■□□□□ 0.75
CLIP2-202ENST00000361545 SESN3P58005 492 aa19.77■□□□□ 0.75
CLIP2-202ENST00000361545 USP49Q70CQ1 688 aa19.77■□□□□ 0.75
CLIP2-202ENST00000361545 SP110Q9HB58 689 aa19.77■□□□□ 0.75
CLIP2-202ENST00000361545 ERAP1Q9NZ08 941 aa19.77■□□□□ 0.75
CLIP2-202ENST00000361545 NVLO15381 856 aaKnown RBP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 EPHX2P34913 555 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 ARL4CP56559 192 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 DHX40Q8IX18 779 aaKnown RBP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 ADARB2Q9NS39 739 aaKnown RBP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 PDGFRBP09619 1106 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 SMAD1Q15797 465 aaKnown RBP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 WHAMMQ8TF30 809 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 PGBD4Q96DM1 585 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 MAD2L2Q9UI95 211 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 DIS3Q9Y2L1 958 aaKnown RBP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 PODXLO00592 558 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 KRT7P08729 469 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 RBP5P82980 135 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 NNTQ13423 1086 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 DGKDQ16760 1214 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 HEATR6Q6AI08 1181 aaKnown RBP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 KLC3Q6P597 504 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 LBHD1Q9BQE6 289 aaPredicted RBP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 GTF2A2P52657 109 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 SNRNP35Q16560 246 aaKnown RBP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 TRIM67Q6ZTA4 783 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.76■□□□□ 0.75
CLIP2-202ENST00000361545 TRPC7Q9HCX4 862 aa19.76■□□□□ 0.75
CLIP2-202ENST00000361545 IQANK1A0A1B0GTG1 560 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 RALAP11233 206 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 SERPINB6P35237 376 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 RGS7P49802 495 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 TGFB2P61812 414 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 CXCL9Q07325 125 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 NSUN2Q08J23 767 aaKnown RBP eCLIP19.75■□□□□ 0.75
CLIP2-202ENST00000361545 LRGUKQ96M69 825 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 KIF2CQ99661 725 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 F8W8V4 182 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 NFRKBQ6P4R8 1299 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 OLA1Q9NTK5 396 aaKnown RBP19.75■□□□□ 0.75
CLIP2-202ENST00000361545 FAN1Q9Y2M0 1017 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 CCT5P48643 541 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 CDH6P55285 790 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 IL1RL1Q01638 556 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 STK4Q13043 487 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 ZDHHC15Q96MV8 337 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 MTIF3Q9H2K0 278 aaKnown RBP19.75■□□□□ 0.75
CLIP2-202ENST00000361545 PPME1Q9Y570 386 aa19.75■□□□□ 0.75
CLIP2-202ENST00000361545 NCOA4Q13772 614 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 TRIM72Q6ZMU5 477 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 RIT2Q99578 217 aa19.74■□□□□ 0.75
CLIP2-202ENST00000361545 TCF7P36402 384 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms