RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 IL25Q9H293 177 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 FBLN5Q9UBX5 448 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 L1RE1Q9UN81 338 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 COL5A3P25940 1745 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 NUP98P52948 1817 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 BCL9LQ86UU0 1499 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 MYH3P11055 1940 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 SHTN1A0MZ66 631 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 MEFVO15553 781 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 PRODHO43272 600 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 PAX4O43316 350 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 TOP1P11387 765 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 CPA1P15085 419 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 HSPA1LP34931 641 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 IRX1P78414 480 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 NEDD9Q14511 834 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 CBX2Q14781 532 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 NECTIN1Q15223 517 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 CREB3L3Q68CJ9 461 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 SLC4A10Q6U841 1118 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 RSPO2Q6UXX9 243 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 NSMFQ6X4W1 530 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 FMNL3Q8IVF7 1028 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 VSTM4Q8IW00 320 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 SCUBE1Q8IWY4 988 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 RCBTB1Q8NDN9 531 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 PLEKHO2Q8TD55 490 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 CABS1Q96KC9 395 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 EXOC2Q96KP1 924 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 SDF4Q9BRK5 362 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 DBF4Q9UBU7 674 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 KCNG1Q9UIX4 513 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 RNF114Q9Y508 228 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
UBE2D3-204ENST00000349311 CCDC189A1A4V9 331 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 KCNQ3O43525 872 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 STX10O60499 249 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 CUTAO60888 179 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 SHOX2O60902 331 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 C6orf222P0C671 652 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 GLI4P10075 376 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 LTBRP36941 435 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 KCNAB2Q13303 367 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 CASP8Q14790 479 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 WHAMMP3Q1A5X7 153 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 ADCK5Q3MIX3 580 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 B4GALNT4Q76KP1 1039 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 PPIL6Q8IXY8 311 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 POU5F2Q8N7G0 328 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 THAP3Q8WTV1 239 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 CCDC12Q8WUD4 166 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 DIO2Q92813 273 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 CDIP1Q9H305 208 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 BICC1Q9H694 974 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 ZSWIM4Q9H7M6 989 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 FAM204AQ9H8W3 233 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 DDX21Q9NR30 783 aaKnown RBP eCLIP8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.58□□□□□ -1.045e-8■■■□□ 16.6
UBE2D3-204ENST00000349311 CDC23Q9UJX2 597 aa8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 RBM8AQ9Y5S9 174 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-204ENST00000349311 LY75O60449 1722 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 TAF1LQ8IZX4 1826 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 BCL9O00512 1426 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 PNMA6EA0A0J9YXQ4 647 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 GOLIM4O00461 696 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 CHUKO15111 745 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 NPHS1O60500 1241 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 SNRPA1P09661 255 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 UBTFL1P0CB47 393 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 LCP1P13796 627 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 ELF1P32519 619 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 NF2P35240 595 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 UBASH3AP57075 661 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 PTH1RQ03431 593 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 VPS72Q15906 364 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 C2orf27AQ580R0 203 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 MICALCLQ6ZW33 695 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 G2E3Q7L622 706 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 AMOTL1Q8IY63 956 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 TTC5Q8N0Z6 440 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 PRPF38AQ8NAV1 312 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 DHX58Q96C10 678 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 EVI5LQ96CN4 794 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 BAG1Q99933 345 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 GOLPH3LQ9H4A5 285 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 ANKZF1Q9H8Y5 726 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 GPR27Q9NS67 375 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 KLHL14Q9P2G3 628 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 FAM169AQ9Y6X4 670 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 MYH14Q7Z406 1995 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 BTAF1O14981 1849 aa8.57□□□□□ -1.04
UBE2D3-204ENST00000349311 MYH8P13535 1937 aa8.56□□□□□ -1.04
UBE2D3-204ENST00000349311 OR14I1A6ND48 311 aa8.56□□□□□ -1.04
UBE2D3-204ENST00000349311 LRRC10BA6NIK2 292 aa8.56□□□□□ -1.04
UBE2D3-204ENST00000349311 EXOC5O00471 708 aa8.56□□□□□ -1.04
UBE2D3-204ENST00000349311 SLC27A2O14975 620 aa8.56□□□□□ -1.04
UBE2D3-204ENST00000349311 KIF5CO60282 957 aa8.56□□□□□ -1.04
UBE2D3-204ENST00000349311 PEX10O60683 326 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms