RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 FDX1P10109 184 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 GYS1P13807 737 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 COMTP21964 271 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ARL4CP56559 192 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 SNRNP35Q16560 246 aaKnown RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 MOXD1Q6UVY6 613 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 EXOC8Q8IYI6 725 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ACER1Q8TDN7 264 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 EPN3Q9H201 632 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 VCX3BQ9H321 246 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 TXLNGQ9NUQ3 528 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 RBAKQ9NYW8 714 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 PCSK1NQ9UHG2 260 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 A0A0U1RQJ8 604 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 FOXN3O00409 490 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 EIF3DO15371 548 aaKnown RBP eCLIP7.67□□□□□ -1.18
VCAN-202ENST00000342785 DGAT1O75907 488 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 GGPS1O95749 300 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 RXRBP28702 533 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 GIT2Q14161 759 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 TFDP2Q14188 446 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 RCN2Q14257 317 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 HP1BP3Q5SSJ5 553 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 TNS2Q63HR2 1409 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ZBED1O96006 694 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 PON1P27169 355 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 PPP6R3Q5H9R7 873 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 LRIG3Q6UXM1 1119 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 PDCD7Q8N8D1 485 aaKnown RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.67□□□□□ -1.18
VCAN-202ENST00000342785 ZNF668Q96K58 619 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 TLR10Q9BXR5 811 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 KCNH7Q9NS40 1196 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 FBXO40Q9UH90 709 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 KIF20BQ96Q89 1820 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 PLS3P13797 630 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 CDO1Q16878 200 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 DALRD3Q5D0E6 543 aaKnown RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 IZUMO3Q5VZ72 239 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 KCNK18Q7Z418 384 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ATL2Q8NHH9 583 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 TPCN2Q8NHX9 752 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 C9orf72Q96LT7 481 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 RIC1Q4ADV7 1423 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 COL5A2P05997 1499 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 PHF20L1A8MW92 1017 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 PI4K2BG5E9Z4 385 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 SAT1P21673 171 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 TBXAS1P24557 533 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 COPB2P35606 906 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 KRT17Q04695 432 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 FUT2Q10981 343 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 MKRN4PQ13434 485 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 MED10Q9BTT4 135 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 GOLGA8MH3BSY2 632 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 WNT7AO00755 349 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ARL4AP40617 200 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 PSMC6P62333 389 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ACTN3Q08043 901 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 MEA1Q16626 185 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ZNF699Q32M78 642 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 NBPF9Q3BBW0 867 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 EAPPQ56P03 285 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 ZNF772Q68DY9 489 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 SLC30A10Q6XR72 485 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 HACE1Q8IYU2 909 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 SPATA20Q8TB22 786 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 RAB3IL1Q8TBN0 382 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ZNF473Q8WTR7 871 aaKnown RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 MXRA8Q9BRK3 442 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 PIM2Q9P1W9 311 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 ATF5Q9Y2D1 282 aaPredicted RBP7.67□□□□□ -1.18
VCAN-202ENST00000342785 NUB1Q9Y5A7 615 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 JCADQ9P266 1359 aa7.67□□□□□ -1.18
VCAN-202ENST00000342785 M0QZ92 97 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 KRT37O76014 449 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 ACOT2P49753 483 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 HMGCS2P54868 508 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 CCNA1P78396 465 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 NR1H3Q13133 447 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 TRIM42Q8IWZ5 723 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 HDAC7Q8WUI4 952 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 FAM167AQ96KS9 214 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 AGBL1Q96MI9 1066 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 ZNF302Q9NR11 478 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 ZNF70Q9UC06 446 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 INTUQ9ULD6 942 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 FRMD3A2A2Y4 597 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 DDTLA6NHG4 134 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 ECE1P42892 770 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 GPS1Q13098 491 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 TAF12Q16514 161 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 EPC2Q52LR7 807 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 PLA2G4FQ68DD2 849 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 EPM2AIP1Q7L775 607 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 ZNF571Q7Z3V5 609 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 DPP9Q86TI2 863 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 CASKIN2Q8WXE0 1202 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 ACAD9Q9H845 621 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms