RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 C17orf75Q9HAS0 396 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 IL17RBQ9NRM6 502 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 CXCL11O14625 94 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 GRIN1Q05586 938 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 DHX9Q08211 1270 aaKnown RBP20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 CCDC144BQ3MJ40 725 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 GAS2O43903 313 aaKnown RBP20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 APEX2Q9UBZ4 518 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 A0A1B0GTH6 734 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 CPB1P15086 417 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 LRRC31Q6UY01 552 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 AGXT2Q9BYV1 514 aa20.91■□□□□ 0.94
SEMA6C-201ENST00000341697 MAP1SQ66K74 1059 aaPredicted RBP20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 CFAP57Q96MR6 1250 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 MRIQ9BWK5 157 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 CYP26A1O43174 497 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 ATP1A2P50993 1020 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 EPHB1P54762 984 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 TEX2Q8IWB9 1127 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 FBXL16Q8N461 479 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 SKA2Q8WVK7 121 aaPredicted RBP20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 MCUR1Q96AQ8 359 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 TTC1Q99614 292 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 AGPAT1Q99943 283 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 CYP26B1Q9NR63 512 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 ADGRG1Q9Y653 693 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 MUTP22033 750 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 GNGT1P63211 74 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 NCOA4Q13772 614 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 PTPAQ15257 358 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 NTRK3Q16288 839 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 SGSM1Q2NKQ1 1148 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 RNF180Q86T96 592 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 PDIK1LQ8N165 341 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 FAM71BQ8TC56 605 aa20.9■□□□□ 0.94
SEMA6C-201ENST00000341697 IL18RAPO95256 599 aa20.89■□□□□ 0.94
SEMA6C-201ENST00000341697 MSH2P43246 934 aa20.89■□□□□ 0.94
SEMA6C-201ENST00000341697 MKNK1Q9BUB5 465 aa20.89■□□□□ 0.94
SEMA6C-201ENST00000341697 STK33Q9BYT3 514 aa20.89■□□□□ 0.94
SEMA6C-201ENST00000341697 MED1Q15648 1581 aaPredicted RBP20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 PGK2P07205 417 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 VIL1P09327 827 aaKnown RBP20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 DSG3P32926 999 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 THOC5Q13769 683 aaKnown RBP20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 RAPH1Q70E73 1250 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 SNX9Q9Y5X1 595 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 RPS6KA2Q15349 733 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 FAM102AQ5T9C2 384 aaPredicted RBP20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 PODXLO00592 558 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 NFIBO00712 420 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 KRT7P08729 469 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 ARP10275 920 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 GABPB1Q06547 395 aaPredicted RBP20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 IQCB1Q15051 598 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 PCNX4Q63HM2 1172 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 MORC4Q8TE76 937 aa20.89■□□□□ 0.93
SEMA6C-201ENST00000341697 SF3A3Q12874 501 aaKnown RBP eCLIP20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 GLT1D1Q96MS3 346 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 HEMGNQ9BXL5 484 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 RRAGCQ9HB90 399 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 MAGED2Q9UNF1 606 aaPredicted RBP20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 GSTA1P08263 222 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 GSTA2P09210 222 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 COG7P83436 770 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 BBS9Q3SYG4 887 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 ARHGAP24Q8N264 748 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 APPL2Q8NEU8 664 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 SLC4A1P02730 911 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 GRB10Q13322 594 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 FMO2Q99518 471 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 TRIM62Q9BVG3 475 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 SPATC1LQ9H0A9 340 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 PXMP2Q9NR77 195 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 KLHL14Q9P2G3 628 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 GAKO14976 1311 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 TAP1Q03518 808 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 Q4G0T1 1027 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 WHAMMQ8TF30 809 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 AFG1LQ8WV93 481 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 RFFLQ8WZ73 363 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 PCSK1NQ9UHG2 260 aa20.88■□□□□ 0.93
SEMA6C-201ENST00000341697 CD4P01730 458 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 SYTL5Q8TDW5 730 aaPredicted RBP20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 STILQ15468 1287 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 FHDC1Q9C0D6 1143 aaPredicted RBP20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 KLC2Q9H0B6 622 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 PDE11AQ9HCR9 933 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 PARVAQ9NVD7 372 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 SART1O43290 800 aaKnown RBP20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 ITGA4P13612 1032 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 KCNJ6P48051 423 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 CUL1Q13616 776 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 HERVK_113P62684 666 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 PKN1Q16512 942 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 USP50Q70EL3 339 aaPredicted RBP20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 MTIF3Q9H2K0 278 aaKnown RBP20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 SLC38A7Q9NVC3 462 aa20.87■□□□□ 0.93
SEMA6C-201ENST00000341697 AK9Q5TCS8 1911 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 ATP8B1O43520 1251 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms