RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SOX1O00570 391 aaPredicted RBP16.87■□□□□ 0.29
SEC13-201ENST00000337354 TOM1L1O75674 476 aa16.87■□□□□ 0.29
SEC13-201ENST00000337354 EOMESO95936 686 aa16.87■□□□□ 0.29
SEC13-201ENST00000337354 STAG3L1P0CL83 205 aa16.87■□□□□ 0.29
SEC13-201ENST00000337354 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
SEC13-201ENST00000337354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.87■□□□□ 0.294e-12■■■■■ 32
SEC13-201ENST00000337354 EPM2AIP1Q7L775 607 aaPredicted RBP16.87■□□□□ 0.29
SEC13-201ENST00000337354 CPB2Q96IY4 423 aa16.87■□□□□ 0.29
SEC13-201ENST00000337354 SLC9A7Q96T83 725 aa16.87■□□□□ 0.29
SEC13-201ENST00000337354 CLSTN2Q9H4D0 955 aa16.87■□□□□ 0.29
SEC13-201ENST00000337354 FAM105AQ9NUU6 356 aa16.87■□□□□ 0.29
SEC13-201ENST00000337354 CXXC1Q9P0U4 656 aaPredicted RBP16.87■□□□□ 0.29
SEC13-201ENST00000337354 SIP14410 1827 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 ARID2Q68CP9 1835 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 MYBP10242 640 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 CASP5P51878 434 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 STK4Q13043 487 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 CAMK4Q16566 473 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 LRIT3Q3SXY7 679 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 SLFN12LQ6IEE8 588 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 LINC01599Q8WXQ3 324 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 HPS3Q969F9 1004 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 BICD1Q96G01 975 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 LRCH3Q96II8 777 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 TCHPQ9BT92 498 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 TARS2Q9BW92 718 aaKnown RBP16.86■□□□□ 0.29
SEC13-201ENST00000337354 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 PTPRHQ9HD43 1115 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 SLC39A2Q9NP94 309 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 TMEM161AQ9NX61 479 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 KIAA1468Q9P260 1216 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 PCDHB7Q9Y5E2 793 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 UBE4BO95155 1302 aa16.86■□□□□ 0.29
SEC13-201ENST00000337354 TTLL13PA6NNM8 815 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 HNRNPDLO14979 420 aaKnown RBP16.85■□□□□ 0.29
SEC13-201ENST00000337354 CLDN3O15551 220 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 ATP2A2P16615 1042 aaKnown RBP16.85■□□□□ 0.29
SEC13-201ENST00000337354 PROZP22891 400 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 LIG4P49917 911 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 SNRPFP62306 86 aaKnown RBP16.85■□□□□ 0.29
SEC13-201ENST00000337354 BMT2Q1RMZ1 405 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 DCAF4L1Q3SXM0 396 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 UBXN11Q5T124 520 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 MRPL10Q7Z7H8 261 aaKnown RBP16.85■□□□□ 0.29
SEC13-201ENST00000337354 ECHDC2Q86YB7 292 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 NPAS4Q8IUM7 802 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 HACE1Q8IYU2 909 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 MYOCDQ8IZQ8 938 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 SYCP3Q8IZU3 236 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 CRIPAKQ8N1N5 446 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 RSPH1Q8WYR4 309 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 TRIM6Q9C030 488 aaPredicted RBP16.85■□□□□ 0.29
SEC13-201ENST00000337354 PDZD7Q9H5P4 517 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 UBN1Q9NPG3 1134 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 PCDHB2Q9Y5E7 798 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 TET1Q8NFU7 2136 aa16.85■□□□□ 0.29
SEC13-201ENST00000337354 EVPLQ92817 2033 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.84■□□□□ 0.29
SEC13-201ENST00000337354 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.84■□□□□ 0.29
SEC13-201ENST00000337354 PRPF6O94906 941 aaKnown RBP16.84■□□□□ 0.29
SEC13-201ENST00000337354 EDN1P05305 212 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 ZNF658Q5TYW1 1059 aaPredicted RBP16.84■□□□□ 0.29
SEC13-201ENST00000337354 MPZL3Q6UWV2 235 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 TRIML1Q8N9V2 468 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 KIAA0895Q8NCT3 520 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 SCFD1Q8WVM8 642 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 LRFN2Q9ULH4 789 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 USP20Q9Y2K6 914 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 STYXL1Q9Y6J8 313 aa16.84■□□□□ 0.29
SEC13-201ENST00000337354 HOXA2O43364 376 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 GJB5O95377 273 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 MCF2P10911 925 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 PPP1R2P41236 205 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 DEFB103AP81534 67 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 MCL1Q07820 350 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 KCNA1Q09470 495 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 KYAT1Q16773 422 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 KNOP1Q1ED39 458 aaKnown RBP16.83■□□□□ 0.28
SEC13-201ENST00000337354 SKOR2Q2VWA4 1001 aaPredicted RBP16.83■□□□□ 0.28
SEC13-201ENST00000337354 ZNF568Q3ZCX4 644 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 COBLL1Q53SF7 1204 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 ZNF598Q86UK7 904 aaKnown RBP16.83■□□□□ 0.28
SEC13-201ENST00000337354 HERC6Q8IVU3 1022 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 GUF1Q8N442 669 aaKnown RBP16.83■□□□□ 0.28
SEC13-201ENST00000337354 GLIS3Q8NEA6 775 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 EIF2AQ9BY44 585 aaKnown RBP16.83■□□□□ 0.28
SEC13-201ENST00000337354 GBP3Q9H0R5 595 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 CGNQ9P2M7 1197 aaKnown RBP16.83■□□□□ 0.28
SEC13-201ENST00000337354 IPPQ9Y573 584 aa16.83■□□□□ 0.28
SEC13-201ENST00000337354 ABLIM1O14639 778 aa16.82■□□□□ 0.28
SEC13-201ENST00000337354 NPTXRO95502 500 aa16.82■□□□□ 0.28
SEC13-201ENST00000337354 EEF1DP3Q658K8 133 aa16.82■□□□□ 0.28
SEC13-201ENST00000337354 HS2ST1Q7LGA3 356 aa16.82■□□□□ 0.28
SEC13-201ENST00000337354 CDR2LQ86X02 465 aaPredicted RBP16.82■□□□□ 0.28
SEC13-201ENST00000337354 GOLGA5Q8TBA6 731 aa16.82■□□□□ 0.28
SEC13-201ENST00000337354 ERCC4Q92889 916 aaPredicted RBP16.82■□□□□ 0.28
SEC13-201ENST00000337354 ZBED2Q9BTP6 218 aa16.82■□□□□ 0.28
SEC13-201ENST00000337354 MAN1B1Q9UKM7 699 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms