RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 UBAP1Q9NZ09 502 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 SNRNP200O75643 2136 aaKnown RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 PRAMEF22A3QJZ6 481 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 TEX12Q9BXU0 123 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 ARIH1Q9Y4X5 557 aaPredicted RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 PSMD7P51665 324 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 PEX3P56589 373 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 CCNA1P78396 465 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 PDIA2Q13087 525 aaKnown RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 SEC16BQ96JE7 1060 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 ZBTB39O15060 712 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 SERPIND1P05546 499 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 RECQLP46063 649 aaPredicted RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 KLC1Q07866 573 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 THEMIS2Q5TEJ8 643 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 CPVLQ9H3G5 476 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 C10orf88Q9H8K7 445 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 SSH2Q76I76 1423 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 PLEKHA8P1O95397 391 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 CYLC2Q14093 348 aaPredicted RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 TRIP10Q15642 601 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 ZNF699Q32M78 642 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 ARHGEF1Q92888 912 aaKnown RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 TRIM51Q9BSJ1 452 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 LRRC1Q9BTT6 524 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 MAGEF1Q9HAY2 307 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 FOSP01100 380 aaPredicted RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 POTEMA6NI47 508 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 PPP6R2O75170 966 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 LINC00301Q8NCQ3 95 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 THTPAQ9BU02 230 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 GOLPH3LQ9H4A5 285 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 CLCA2Q9UQC9 943 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 CCT8L1PA6NM43 557 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 M0QYV0 167 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 IZUMO3Q5VZ72 239 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 DHX38Q92620 1227 aaKnown RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 HPCAL4Q9UM19 191 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 M0R3G1 203 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 PAMP19021 973 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 SMARCA1P28370 1054 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 GCLMP48507 274 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 SGO1Q5FBB7 561 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 UTS2BQ765I0 119 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 ZNF555Q8NEP9 628 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 PRPF18Q99633 342 aaKnown RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 FOXP1Q9H334 677 aaPredicted RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 ASAP1Q9ULH1 1129 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 NFIBO00712 420 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 MOCS2O96007 188 aaPredicted RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 CYP2D6P10635 497 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 EIF2B2P49770 351 aaKnown RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 NME5P56597 212 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 NFKBIL1Q9UBC1 381 aaPredicted RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 FKBP3Q00688 224 aaKnown RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 KIAA1755Q5JYT7 1200 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 SHCBP1LQ9BZQ2 653 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 SP110Q9HB58 689 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 TRPC7Q9HCX4 862 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 DNAJC12Q9UKB3 198 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 CCDC88CQ9P219 2028 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 USP17L5A8MUK1 530 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 TJP3O95049 919 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 BMP3P12645 472 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 NFX1Q12986 1120 aaKnown RBP8.36□□□□□ -1.07
CIITA-201ENST00000324288 SLC7A5P2Q9GIP4 190 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 ADAM22Q9P0K1 906 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 ARL2BPQ9Y2Y0 163 aa8.36□□□□□ -1.07
CIITA-201ENST00000324288 ANKRD40Q6AI12 368 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 CYFIP1Q7L576 1253 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 OR2W6PQ8NHA6 318 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 SOX13Q9UN79 622 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 XDHP47989 1333 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 DENND3A2RUS2 1198 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 LCP1P13796 627 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 LAMB3Q13751 1172 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 KCTD21Q4G0X4 260 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 ARHGAP17Q68EM7 881 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 HDDC2Q7Z4H3 204 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 MTBPQ96DY7 904 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 PTPRKQ15262 1439 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 MLH3Q9UHC1 1453 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 TBC1D4O60343 1298 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 HOXB7P09629 217 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 PDHBP11177 359 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 PAX7P23759 505 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 S100A5P33763 92 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 TWF2Q6IBS0 349 aaKnown RBP8.35□□□□□ -1.07
CIITA-201ENST00000324288 CUEDC2Q9H467 287 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 OTUD4Q01804 1114 aaKnown RBP8.35□□□□□ -1.07
CIITA-201ENST00000324288 INPP5AQ14642 412 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 ALKBH5Q6P6C2 394 aaKnown RBP8.35□□□□□ -1.07
CIITA-201ENST00000324288 OR6P1Q8NGX9 317 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 FAM81BQ96LP2 452 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 SPDYE5A6NIY4 337 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 KCNA2P16389 499 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 CYP2C19P33261 490 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 NR1H3Q13133 447 aa8.35□□□□□ -1.07
CIITA-201ENST00000324288 SPDYE7PQ495Y7 208 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms