RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 ANHXE9PGG2 379 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 NPEPPSP55786 919 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 AKAP17AQ02040 695 aaKnown RBP21.93■■□□□ 1.1
SSNA1-201ENST00000322310 DSG1Q02413 1049 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 TSGA10IPQ3SY00 556 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 Q4G0T1 1027 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 GLYCTKQ8IVS8 523 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 MAML2Q8IZL2 1156 aaPredicted RBP21.93■■□□□ 1.1
SSNA1-201ENST00000322310 SUMF1Q8NBK3 374 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 PJA1Q8NG27 643 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 PRPF31Q8WWY3 499 aaKnown RBP21.93■■□□□ 1.1
SSNA1-201ENST00000322310 NT5C3AQ9H0P0 336 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 SLC2A4RGQ9NR83 387 aa21.93■■□□□ 1.1
SSNA1-201ENST00000322310 BMP2KQ9NSY1 1161 aaPredicted RBP21.93■■□□□ 1.1
SSNA1-201ENST00000322310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.93■■□□□ 1.1
SSNA1-201ENST00000322310 COL4A3Q01955 1670 aa21.92■■□□□ 1.1
SSNA1-201ENST00000322310 TGM5O43548 720 aa21.92■■□□□ 1.1
SSNA1-201ENST00000322310 NCLP19338 710 aaKnown RBP21.92■■□□□ 1.1
SSNA1-201ENST00000322310 RSPO4Q2I0M5 234 aaPredicted RBP21.92■■□□□ 1.1
SSNA1-201ENST00000322310 Q6ZUG5 572 aa21.92■■□□□ 1.1
SSNA1-201ENST00000322310 BRF1Q92994 677 aa21.92■■□□□ 1.1
SSNA1-201ENST00000322310 TMEM143Q96AN5 459 aa21.92■■□□□ 1.1
SSNA1-201ENST00000322310 GAD1Q99259 594 aa21.92■■□□□ 1.1
SSNA1-201ENST00000322310 JPH2Q9BR39 696 aaPredicted RBP21.92■■□□□ 1.1
SSNA1-201ENST00000322310 RPP25Q9BUL9 199 aaKnown RBP21.92■■□□□ 1.1
SSNA1-201ENST00000322310 SLC26A6Q9BXS9 759 aa21.92■■□□□ 1.1
SSNA1-201ENST00000322310 RNF39Q9H2S5 420 aa21.92■■□□□ 1.1
SSNA1-201ENST00000322310 NID2Q14112 1375 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 ARL5CA6NH57 179 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 GAS2O43903 313 aaKnown RBP21.91■■□□□ 1.1
SSNA1-201ENST00000322310 KRT37O76014 449 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 PAPLNO95428 1278 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 ITGA4P13612 1032 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 MLH1P40692 756 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 PSMC5P62195 406 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 DSC1Q08554 894 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 NTRK3Q16288 839 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 SRGAP1Q7Z6B7 1085 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 ETNPPLQ8TBG4 499 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 ZFP42Q96MM3 310 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 CNTNAP3BQ96NU0 1288 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 EIF2AQ9BY44 585 aaKnown RBP21.91■■□□□ 1.1
SSNA1-201ENST00000322310 CNTNAP3Q9BZ76 1288 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 PLEKHA4Q9H4M7 779 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 MIOSQ9NXC5 875 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 HES2Q9Y543 173 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 IPPQ9Y573 584 aa21.91■■□□□ 1.1
SSNA1-201ENST00000322310 FANCMQ8IYD8 2048 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 GPR179Q6PRD1 2367 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 EML1O00423 815 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 RPL17P18621 184 aaKnown RBP21.9■■□□□ 1.1
SSNA1-201ENST00000322310 SCNN1GP51170 649 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 NLRP5P59047 1200 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 LAMTOR4Q0VGL1 99 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 KRT32Q14532 448 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 HDAC7Q8WUI4 952 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 PSPC1Q8WXF1 523 aaKnown RBP21.9■■□□□ 1.1
SSNA1-201ENST00000322310 SLC7A3Q8WY07 619 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 RNF26Q9BY78 433 aaPredicted RBP21.9■■□□□ 1.1
SSNA1-201ENST00000322310 PRKD2Q9BZL6 878 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 CHST7Q9NS84 486 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 ZDHHC7Q9NXF8 308 aa21.9■■□□□ 1.1
SSNA1-201ENST00000322310 CYP3A7-CYP3A51PA0A087WV96 503 aa21.89■■□□□ 1.09
SSNA1-201ENST00000322310 KINO60870 393 aaKnown RBP21.89■■□□□ 1.09
SSNA1-201ENST00000322310 HMGB1P09429 215 aaKnown RBP21.89■■□□□ 1.09
SSNA1-201ENST00000322310 CYP3A7P24462 503 aa21.89■■□□□ 1.09
SSNA1-201ENST00000322310 STARD6P59095 220 aa21.89■■□□□ 1.09
SSNA1-201ENST00000322310 GPC5P78333 572 aa21.89■■□□□ 1.09
SSNA1-201ENST00000322310 FGF14Q92915 247 aa21.89■■□□□ 1.09
SSNA1-201ENST00000322310 CEP170P1Q96L14 293 aa21.89■■□□□ 1.09
SSNA1-201ENST00000322310 GPR62Q9BZJ7 368 aa21.89■■□□□ 1.09
SSNA1-201ENST00000322310 DHX33Q9H6R0 707 aaKnown RBP21.89■■□□□ 1.09
SSNA1-201ENST00000322310 UBN1Q9NPG3 1134 aa21.89■■□□□ 1.09
SSNA1-201ENST00000322310 WRAP73Q9P2S5 460 aaPredicted RBP21.89■■□□□ 1.09
SSNA1-201ENST00000322310 IRX6P78412 446 aaPredicted RBP21.88■■□□□ 1.09
SSNA1-201ENST00000322310 SNW1Q13573 536 aaKnown RBP21.88■■□□□ 1.09
SSNA1-201ENST00000322310 LILRA6Q6PI73 481 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 PARM1Q6UWI2 310 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 RNF149Q8NC42 400 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 CNNM3Q8NE01 707 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 RABGGTAQ92696 567 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 CPB2Q96IY4 423 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 APOL6Q9BWW8 343 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 CACNA1IQ9P0X4 2223 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 EPG5Q9HCE0 2579 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 CACNA1BQ00975 2339 aa21.88■■□□□ 1.09
SSNA1-201ENST00000322310 ERLIN2O94905 339 aa21.87■■□□□ 1.09
SSNA1-201ENST00000322310 FSHRP23945 695 aa21.87■■□□□ 1.09
SSNA1-201ENST00000322310 QARSP47897 775 aaKnown RBP21.87■■□□□ 1.09
SSNA1-201ENST00000322310 FUT10Q6P4F1 479 aa21.87■■□□□ 1.09
SSNA1-201ENST00000322310 MBOAT7Q96N66 472 aa21.87■■□□□ 1.09
SSNA1-201ENST00000322310 NCOA5Q9HCD5 579 aaKnown RBP21.87■■□□□ 1.09
SSNA1-201ENST00000322310 SPATA6Q9NWH7 488 aaPredicted RBP21.87■■□□□ 1.09
SSNA1-201ENST00000322310 MTF2Q9Y483 593 aaPredicted RBP21.87■■□□□ 1.09
SSNA1-201ENST00000322310 KANSL1LA0AUZ9 987 aa21.86■■□□□ 1.09
SSNA1-201ENST00000322310 SLC37A4O43826 429 aa21.86■■□□□ 1.09
SSNA1-201ENST00000322310 TSPAN1O60635 241 aa21.86■■□□□ 1.09
SSNA1-201ENST00000322310 ZMYND10O75800 440 aa21.86■■□□□ 1.09
SSNA1-201ENST00000322310 IFNAR1P17181 557 aa21.86■■□□□ 1.09
SSNA1-201ENST00000322310 NTHL1P78549 312 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms