RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ATP6V0A1Q93050 837 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 BORCS6Q96GS4 357 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 GANQ9H2C0 597 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 UBE2TQ9NPD8 197 aaPredicted RBP8.24□□□□□ -1.09
TRIM55-202ENST00000315962 GINM1Q9NU53 330 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 DNAJC12Q9UKB3 198 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 TBX20Q9UMR3 447 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 GINS2Q9Y248 185 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 A0A1W2PQJ5 194 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 PDHXO00330 501 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 NOP56O00567 594 aaKnown RBP8.24□□□□□ -1.09
TRIM55-202ENST00000315962 ERLIN2O94905 339 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 KLRC1P26715 233 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 SFNP31947 248 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 OAZ1P54368 228 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 WNT7BP56706 349 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 BFSP1Q12934 665 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 DRAP1Q14919 205 aaPredicted RBP8.24□□□□□ -1.09
TRIM55-202ENST00000315962 ASIC2Q16515 512 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 OTUD6AQ7L8S5 288 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 NIPA1Q7RTP0 329 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 ZBTB33Q86T24 672 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 KLHL7Q8IXQ5 586 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 RUFY1Q96T51 708 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 PCYT2Q99447 389 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 SIX2Q9NPC8 291 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 AGTPBP1Q9UPW5 1226 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 STK24Q9Y6E0 443 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 GRIN2DO15399 1336 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 ATAD5Q96QE3 1844 aa8.24□□□□□ -1.09
TRIM55-202ENST00000315962 FOXN3O00409 490 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 PPP1R37O75864 691 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 FARP2O94887 1054 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 STBD1O95210 358 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 CELF2O95319 508 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 GLI1P08151 1106 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 STAT5BP51692 787 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 VAMP7P51809 220 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 MNAT1P51948 309 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SMTNP53814 917 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 GUCY2DQ02846 1103 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 MOGSQ13724 837 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SNRNP35Q16560 246 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 BMT2Q1RMZ1 405 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 C2CD6Q53TS8 623 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 MIS18BP1Q6P0N0 1132 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SLC39A4Q6P5W5 647 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 ARMC9Q7Z3E5 817 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 IRF2BP2Q7Z5L9 587 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 RIOX2Q8IUF8 465 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 PPM1KQ8N3J5 372 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 PPM1EQ8WY54 764 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 ZIM3Q96PE6 472 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 ACCSQ96QU6 501 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 OSBPL9Q96SU4 736 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 MMP19Q99542 508 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 MYO1AQ9UBC5 1043 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 KCNG1Q9UIX4 513 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 FAM184BQ9ULE4 1060 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SNX12Q9UMY4 172 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SYNGAP1Q96PV0 1343 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 GSTTP1A0A1W2PQM5 241 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 EBAG9O00559 213 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 NDUFAB1O14561 156 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 ATP2A1O14983 1001 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 EIF3DO15371 548 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 EDN1P05305 212 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SUPT20HL2P0C7V6 817 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 FDX1P10109 184 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 TXNP10599 105 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 AARSP49588 968 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 VAV2P52735 878 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 MYL7Q01449 175 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 CKAP4Q07065 602 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 FIGNQ5HY92 759 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 PRAMEF19Q5SWL8 479 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 GPAT2Q6NUI2 795 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 CHADLQ6NUI6 762 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 DPY19L2P1Q6NXN4 242 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 C8orf74Q6P047 294 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 STXBP4Q6ZWJ1 553 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 USP50Q70EL3 339 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 DDX42Q86XP3 938 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 ARHGEF19Q8IW93 802 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 XXYLT1Q8NBI6 393 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 ASAP3Q8TDY4 903 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 DHX38Q92620 1227 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 SPATA33Q96N06 139 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 TCHPQ9BT92 498 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 TARS2Q9BW92 718 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 EPB41L5Q9HCM4 733 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 PLCB1Q9NQ66 1216 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 RNF19AQ9NV58 838 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 MAP3K20Q9NYL2 800 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 TAS2R14Q9NYV8 317 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 DBR1Q9UK59 544 aaKnown RBP8.23□□□□□ -1.09
TRIM55-202ENST00000315962 CAPN7Q9Y6W3 813 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 CCL15-CCL14A0A0B4J2E2 113 aa8.23□□□□□ -1.09
TRIM55-202ENST00000315962 EVI5O60447 810 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms