RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 RASIP1Q5U651 963 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 SLC27A1Q6PCB7 646 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 TDHQ8IZJ6 230 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 ADPGKQ9BRR6 497 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 PDZD7Q9H5P4 517 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 TNFSF13BQ9Y275 285 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 C9IYK1 514 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 HNRNPDLO14979 420 aaKnown RBP26.85■■□□□ 1.89
HOXC9-201ENST00000303450 LIG4P49917 911 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 DEFB103AP81534 67 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 ZPBP2Q6X784 338 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 SYCP3Q8IZU3 236 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 TRAIPQ9BWF2 469 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 TRIM6Q9C030 488 aaPredicted RBP26.85■■□□□ 1.89
HOXC9-201ENST00000303450 PRO3102Q9H379 93 aa26.85■■□□□ 1.89
HOXC9-201ENST00000303450 SKIP12755 728 aa26.84■■□□□ 1.89
HOXC9-201ENST00000303450 SARSP49591 514 aaKnown RBP26.84■■□□□ 1.89
HOXC9-201ENST00000303450 RAB27AP51159 221 aa26.84■■□□□ 1.89
HOXC9-201ENST00000303450 KCNA1Q09470 495 aa26.84■■□□□ 1.89
HOXC9-201ENST00000303450 EPM2AIP1Q7L775 607 aaPredicted RBP26.84■■□□□ 1.89
HOXC9-201ENST00000303450 KIAA0895Q8NCT3 520 aa26.84■■□□□ 1.89
HOXC9-201ENST00000303450 TCHPQ9BT92 498 aa26.84■■□□□ 1.89
HOXC9-201ENST00000303450 TMEM206Q9H813 350 aa26.84■■□□□ 1.89
HOXC9-201ENST00000303450 FAM105AQ9NUU6 356 aa26.84■■□□□ 1.89
HOXC9-201ENST00000303450 RNF216Q9NWF9 866 aaPredicted RBP26.84■■□□□ 1.89
HOXC9-201ENST00000303450 TTC3P53804 2025 aa26.84■■□□□ 1.89
HOXC9-201ENST00000303450 A0A0U1RQF3 1178 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 TOM1L1O75674 476 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 FAM189BP81408 668 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 UBXN11Q5T124 520 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 EEF1DP3Q658K8 133 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 APBB1IPQ7Z5R6 666 aaPredicted RBP26.83■■□□□ 1.89
HOXC9-201ENST00000303450 ZNF507Q8TCN5 953 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 SCFD1Q8WVM8 642 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 SLC9A7Q96T83 725 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 EIF2AQ9BY44 585 aaKnown RBP26.83■■□□□ 1.89
HOXC9-201ENST00000303450 KIAA1468Q9P260 1216 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 LRFN2Q9ULH4 789 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 PCDHB2Q9Y5E7 798 aa26.83■■□□□ 1.89
HOXC9-201ENST00000303450 UBE4BO95155 1302 aa26.82■■□□□ 1.88
HOXC9-201ENST00000303450 UPP2O95045 317 aa26.82■■□□□ 1.88
HOXC9-201ENST00000303450 NPTXRO95502 500 aa26.82■■□□□ 1.88
HOXC9-201ENST00000303450 PIGRP01833 764 aa26.82■■□□□ 1.88
HOXC9-201ENST00000303450 ATP2A2P16615 1042 aaKnown RBP26.82■■□□□ 1.88
HOXC9-201ENST00000303450 ECHDC2Q86YB7 292 aa26.82■■□□□ 1.88
HOXC9-201ENST00000303450 PHOSPHO2Q8TCD6 241 aa26.82■■□□□ 1.88
HOXC9-201ENST00000303450 ANKFY1Q9P2R3 1169 aa26.82■■□□□ 1.88
HOXC9-201ENST00000303450 PCDHB7Q9Y5E2 793 aa26.82■■□□□ 1.88
HOXC9-201ENST00000303450 STAG3L1P0CL83 205 aa26.81■■□□□ 1.88
HOXC9-201ENST00000303450 MATR3P43243 847 aaKnown RBP eCLIP26.81■■□□□ 1.88
HOXC9-201ENST00000303450 ZNF568Q3ZCX4 644 aa26.81■■□□□ 1.88
HOXC9-201ENST00000303450 RNF169Q8NCN4 708 aa26.81■■□□□ 1.88
HOXC9-201ENST00000303450 TOP1MTQ969P6 601 aa26.81■■□□□ 1.88
HOXC9-201ENST00000303450 GTPBP4Q9BZE4 634 aaKnown RBP26.81■■□□□ 1.88
HOXC9-201ENST00000303450 PTPRHQ9HD43 1115 aa26.81■■□□□ 1.88
HOXC9-201ENST00000303450 MAN1B1Q9UKM7 699 aa26.81■■□□□ 1.88
HOXC9-201ENST00000303450 COLQQ9Y215 455 aaPredicted RBP26.81■■□□□ 1.88
HOXC9-201ENST00000303450 GDAQ9Y2T3 454 aa26.81■■□□□ 1.88
HOXC9-201ENST00000303450 RANBP2P49792 3224 aaKnown RBP26.81■■□□□ 1.88
HOXC9-201ENST00000303450 CLDN3O15551 220 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 KIF20AO95235 890 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 DCAF4L1Q3SXM0 396 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 ZNF658Q5TYW1 1059 aaPredicted RBP26.8■■□□□ 1.88
HOXC9-201ENST00000303450 MPZL3Q6UWV2 235 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 ZBTB33Q86T24 672 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 NPAS4Q8IUM7 802 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 NELFCDQ8IXH7 590 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 ZBTB45Q96K62 511 aaPredicted RBP26.8■■□□□ 1.88
HOXC9-201ENST00000303450 ELAC1Q9H777 363 aaKnown RBP26.8■■□□□ 1.88
HOXC9-201ENST00000303450 TMEM161AQ9NX61 479 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 ZNF623O75123 536 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 EOMESO95936 686 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 PROZP22891 400 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 BMT2Q1RMZ1 405 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 ISM2Q6H9L7 571 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 FAM117BQ6P1L5 589 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 TMCO2Q7Z6W1 182 aaPredicted RBP26.8■■□□□ 1.88
HOXC9-201ENST00000303450 IPPQ9Y573 584 aa26.8■■□□□ 1.88
HOXC9-201ENST00000303450 BIN1O00499 593 aa26.79■■□□□ 1.88
HOXC9-201ENST00000303450 HARSP12081 509 aaKnown RBP26.79■■□□□ 1.88
HOXC9-201ENST00000303450 HOXD13P35453 343 aa26.79■■□□□ 1.88
HOXC9-201ENST00000303450 HACE1Q8IYU2 909 aa26.79■■□□□ 1.88
HOXC9-201ENST00000303450 PGBD4Q96DM1 585 aa26.79■■□□□ 1.88
HOXC9-201ENST00000303450 ZBED2Q9BTP6 218 aa26.79■■□□□ 1.88
HOXC9-201ENST00000303450 GBP3Q9H0R5 595 aa26.79■■□□□ 1.88
HOXC9-201ENST00000303450 CDT1Q9H211 546 aa26.79■■□□□ 1.88
HOXC9-201ENST00000303450 IKZF4Q9H2S9 585 aa26.79■■□□□ 1.88
HOXC9-201ENST00000303450 A0A1W2PPC1 479 aa26.78■■□□□ 1.88
HOXC9-201ENST00000303450 ANKRD63C9JTQ0 380 aa26.78■■□□□ 1.88
HOXC9-201ENST00000303450 MCF2P10911 925 aa26.78■■□□□ 1.88
HOXC9-201ENST00000303450 NOLC1Q14978 699 aaKnown RBP eCLIP26.78■■□□□ 1.88
HOXC9-201ENST00000303450 SLFN12LQ6IEE8 588 aa26.78■■□□□ 1.88
HOXC9-201ENST00000303450 SLC39A4Q6P5W5 647 aa26.78■■□□□ 1.88
HOXC9-201ENST00000303450 HERC6Q8IVU3 1022 aa26.78■■□□□ 1.88
HOXC9-201ENST00000303450 SMYD4Q8IYR2 804 aaPredicted RBP26.78■■□□□ 1.88
HOXC9-201ENST00000303450 SMG8Q8ND04 991 aaKnown RBP26.78■■□□□ 1.88
HOXC9-201ENST00000303450 MAPK8IP1Q9UQF2 711 aa26.78■■□□□ 1.88
HOXC9-201ENST00000303450 HES2Q9Y543 173 aa26.78■■□□□ 1.88
HOXC9-201ENST00000303450 PTPRSQ13332 1948 aa26.77■■□□□ 1.88
HOXC9-201ENST00000303450 TISP43B9A030 160 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms