RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 PAIP2Q9BPZ3 127 aaKnown RBP17.04■□□□□ 0.32
CACNB3-201ENST00000301050 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.04■□□□□ 0.32
CACNB3-201ENST00000301050 NAGPAQ9UK23 515 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 PTDSS1P48651 473 aaKnown RBP17.04■□□□□ 0.32
CACNB3-201ENST00000301050 UBE2SQ16763 222 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 TSNAXIP1Q2TAA8 658 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 ATL2Q8NHH9 583 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 UCMAQ8WVF2 138 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 TSG101Q99816 390 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 MMTAG2Q9BU76 263 aaKnown RBP17.04■□□□□ 0.32
CACNB3-201ENST00000301050 DDX23Q9BUQ8 820 aaKnown RBP17.04■□□□□ 0.32
CACNB3-201ENST00000301050 MLXIPLQ9NP71 852 aa17.04■□□□□ 0.32
CACNB3-201ENST00000301050 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 PNMA6FA0A0J9YX94 578 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
CACNB3-201ENST00000301050 RAD17O75943 681 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 CREB1P16220 341 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 LRRC23Q53EV4 343 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-201ENST00000301050 FOXB2Q5VYV0 432 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 CGB2Q6NT52 195 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 ALKBH5Q6P6C2 394 aaKnown RBP17.03■□□□□ 0.32
CACNB3-201ENST00000301050 SV2BQ7L1I2 683 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 ECHDC2Q86YB7 292 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 FAM13CQ8NE31 585 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 FAM136AQ96C01 138 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 HES6Q96HZ4 224 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 GANQ9H2C0 597 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 VCXQ9H320 206 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 PVALEFA0A1B0GWK0 134 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 TMEM120BA0PK00 339 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 FGFR4P22455 802 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 KIAA1755Q5JYT7 1200 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 CC2D2BQ6DHV5 1058 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 IRF2BP2Q7Z5L9 587 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 TTLL6Q8N841 843 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 ENDOVQ8N8Q3 282 aaKnown RBP17.03■□□□□ 0.32
CACNB3-201ENST00000301050 ERVK-5Q9HDB9 667 aa17.03■□□□□ 0.32
CACNB3-201ENST00000301050 ZNF277Q9NRM2 450 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-201ENST00000301050 TTC7AQ9ULT0 858 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-201ENST00000301050 H0Y3Z8 333 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 hCG_1984214I3L0E3 225 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 DPEP1P16444 411 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 RNF43Q68DV7 783 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 OTUD6AQ7L8S5 288 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 ZNF713Q8N859 430 aaPredicted RBP17.02■□□□□ 0.32
CACNB3-201ENST00000301050 FGD4Q96M96 766 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 LRMDAQ9H2I8 198 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 TXLNGQ9NUQ3 528 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 KLHL14Q9P2G3 628 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 CTNNAL1Q9UBT7 734 aa17.02■□□□□ 0.32
CACNB3-201ENST00000301050 TRAF5O00463 557 aa17.02■□□□□ 0.31
CACNB3-201ENST00000301050 AFPP02771 609 aaKnown RBP17.02■□□□□ 0.31
CACNB3-201ENST00000301050 TECP42680 631 aa17.02■□□□□ 0.31
CACNB3-201ENST00000301050 JAG1P78504 1218 aa17.02■□□□□ 0.31
CACNB3-201ENST00000301050 GPATCH4Q5T3I0 446 aaKnown RBP17.02■□□□□ 0.31
CACNB3-201ENST00000301050 IRGCQ6NXR0 463 aa17.02■□□□□ 0.31
CACNB3-201ENST00000301050 JAMLQ86YT9 394 aa17.02■□□□□ 0.31
CACNB3-201ENST00000301050 CKAP2Q8WWK9 683 aa17.02■□□□□ 0.31
CACNB3-201ENST00000301050 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.31
CACNB3-201ENST00000301050 GRHL1Q9NZI5 618 aa17.02■□□□□ 0.31
CACNB3-201ENST00000301050 COL4A5P29400 1685 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 FAM187AA6NFU0 413 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 TNNI2P48788 182 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 FKBP3Q00688 224 aaKnown RBP17.01■□□□□ 0.31
CACNB3-201ENST00000301050 PRPF4BQ13523 1007 aaKnown RBP17.01■□□□□ 0.31
CACNB3-201ENST00000301050 MFSD5Q6N075 450 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 TATDN1Q6P1N9 297 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 VSTM1Q6UX27 236 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 SIAH1Q8IUQ4 282 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 AGGF1Q8N302 714 aaeCLIP17.01■□□□□ 0.31
CACNB3-201ENST00000301050 ANKRD42Q8N9B4 389 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 GDAP1Q8TB36 358 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 TRAPPC9Q96Q05 1148 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 UBE2OQ9C0C9 1292 aaKnown RBP17.01■□□□□ 0.31
CACNB3-201ENST00000301050 RIC8AQ9NPQ8 531 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 TCP10L2B9ZVM9 353 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 SMAPO00193 183 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 RIPK2O43353 540 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 TDP2O95551 362 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 CCDC15Q0P6D6 951 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 DYNC1I2Q13409 638 aaKnown RBP17.01■□□□□ 0.31
CACNB3-201ENST00000301050 SLFN13Q68D06 897 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 MAIP1Q8WWC4 291 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 TMEM237Q96Q45 408 aa17.01■□□□□ 0.31
CACNB3-201ENST00000301050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.01■□□□□ 0.31
CACNB3-201ENST00000301050 ZBTB5O15062 677 aa17■□□□□ 0.31
CACNB3-201ENST00000301050 SLC37A4O43826 429 aa17■□□□□ 0.31
CACNB3-201ENST00000301050 EDIL3O43854 480 aa17■□□□□ 0.31
CACNB3-201ENST00000301050 DRG2P55039 364 aaKnown RBP17■□□□□ 0.31
CACNB3-201ENST00000301050 SNAP25P60880 206 aa17■□□□□ 0.31
CACNB3-201ENST00000301050 RRP1BQ14684 758 aaKnown RBP17■□□□□ 0.31
CACNB3-201ENST00000301050 ABCB5Q2M3G0 1257 aa17■□□□□ 0.31
CACNB3-201ENST00000301050 MUM1Q2TAK8 710 aa17■□□□□ 0.31
CACNB3-201ENST00000301050 ZCWPW2Q504Y3 356 aa17■□□□□ 0.31
CACNB3-201ENST00000301050 DCAF12L1Q5VU92 463 aa17■□□□□ 0.31
CACNB3-201ENST00000301050 SYCE1Q8N0S2 351 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms