RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CTTNBP2NLQ9P2B4 639 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 DNAJC12Q9UKB3 198 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 USH1CQ9Y6N9 552 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 DCTN3O75935 186 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 TTC4O95801 387 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 GH1P01241 217 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 PDHA1P08559 390 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 TAC1P20366 129 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 HOXD13P35453 343 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 GIT2Q14161 759 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 TMEM154Q6P9G4 183 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 MIGA2Q7L4E1 593 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 ZDHHC14Q8IZN3 488 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 C12orf50Q8NA57 414 aaPredicted RBP12.33□□□□□ -0.44
TROAP-201ENST00000257909 RBBP8NLQ8NC74 664 aaPredicted RBP12.33□□□□□ -0.44
TROAP-201ENST00000257909 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 ERP27Q96DN0 273 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 SYT15Q9BQS2 421 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 BTG4Q9NY30 223 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 LGALS13Q9UHV8 139 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 PTPN22Q9Y2R2 807 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 EIF4E1BA6NMX2 242 aaKnown RBP12.33□□□□□ -0.44
TROAP-201ENST00000257909 ANKRD63C9JTQ0 380 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 HGSO14964 777 aaPredicted RBP12.33□□□□□ -0.44
TROAP-201ENST00000257909 ITIH2P19823 946 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 KLRK1P26718 216 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 PTDSS1P48651 473 aaKnown RBP12.33□□□□□ -0.44
TROAP-201ENST00000257909 CASP4P49662 377 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 CLK2P49760 499 aaKnown RBP12.33□□□□□ -0.44
TROAP-201ENST00000257909 HSPA2P54652 639 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 MPP2Q14168 576 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 SPDYAQ5MJ70 313 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 IRGCQ6NXR0 463 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 SFR1Q86XK3 245 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 KRT35Q92764 455 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 SLCO2A1Q92959 643 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 DCLRE1BQ9H816 532 aa12.33□□□□□ -0.44
TROAP-201ENST00000257909 SEPT11Q9NVA2 429 aaKnown RBP12.33□□□□□ -0.44
TROAP-201ENST00000257909 ASTN1O14525 1302 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 FRMPD4Q14CM0 1322 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 RXRBP28702 533 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 CDK8P49336 464 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 GSTO1P78417 241 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 ASPRV1Q53RT3 343 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 C16orf86Q6ZW13 317 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 SLC13A5Q86YT5 568 aaPredicted RBP12.32□□□□□ -0.44
TROAP-201ENST00000257909 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 GJA10Q969M2 543 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 CRAMP1Q96RY5 1269 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
TROAP-201ENST00000257909 AAASQ9NRG9 546 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 WDR35Q9P2L0 1181 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 C2CD2Q9Y426 696 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 TRAFD1O14545 582 aaPredicted RBP12.32□□□□□ -0.44
TROAP-201ENST00000257909 MAGEB2O15479 319 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 CDH16O75309 829 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 GSTA2P09210 222 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 SP100P23497 879 aaPredicted RBP12.32□□□□□ -0.44
TROAP-201ENST00000257909 TARSP26639 723 aaKnown RBP12.32□□□□□ -0.44
TROAP-201ENST00000257909 PSMC2P35998 433 aaKnown RBP12.32□□□□□ -0.44
TROAP-201ENST00000257909 PPP4CP60510 307 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 SNX1Q13596 522 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 MUM1Q2TAK8 710 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 BORCS6Q96GS4 357 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 TRAPPC9Q96Q05 1148 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 TBC1D10AQ9BXI6 508 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 GPR88Q9GZN0 384 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 LRRC19Q9H756 370 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.32□□□□□ -0.44
TROAP-201ENST00000257909 TAS2R14Q9NYV8 317 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 TFCP2L1Q9NZI6 479 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 SLAIN2Q9P270 581 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 STOML1Q9UBI4 398 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 HAO1Q9UJM8 370 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 USP20Q9Y2K6 914 aa12.32□□□□□ -0.44
TROAP-201ENST00000257909 HNRNPCL1O60812 293 aaKnown RBP12.31□□□□□ -0.44
TROAP-201ENST00000257909 MED24O75448 989 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 LDHBP07195 334 aaKnown RBP12.31□□□□□ -0.44
TROAP-201ENST00000257909 CRKLP46109 303 aaKnown RBP12.31□□□□□ -0.44
TROAP-201ENST00000257909 NOVP48745 357 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 FMO5P49326 533 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 CAV1Q03135 178 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
TROAP-201ENST00000257909 KIF22Q14807 665 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 UBE2SQ16763 222 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 RHBDF2Q6PJF5 856 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 LONP2Q86WA8 852 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 SYT2Q8N9I0 419 aaPredicted RBP12.31□□□□□ -0.44
TROAP-201ENST00000257909 CEP95Q96GE4 821 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 CCDC77Q9BR77 488 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 REEP2Q9BRK0 252 aa12.31□□□□□ -0.44
TROAP-201ENST00000257909 ANKRD2Q9GZV1 360 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms