RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 BICD1Q96G01 975 aa16.65■□□□□ 0.26
ATP6V1F-201ENST00000249289 GSDMAQ96QA5 445 aa16.65■□□□□ 0.26
ATP6V1F-201ENST00000249289 ACO2Q99798 780 aaKnown RBP16.65■□□□□ 0.26
ATP6V1F-201ENST00000249289 ADPGKQ9BRR6 497 aa16.65■□□□□ 0.26
ATP6V1F-201ENST00000249289 PDZD7Q9H5P4 517 aa16.65■□□□□ 0.26
ATP6V1F-201ENST00000249289 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
ATP6V1F-201ENST00000249289 TNFSF13BQ9Y275 285 aa16.65■□□□□ 0.26
ATP6V1F-201ENST00000249289 TTLL13PA6NNM8 815 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 STAG3L1P0CL83 205 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 ATP2A2P16615 1042 aaKnown RBP16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 LIG4P49917 911 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 CASP5P51878 434 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 DCAF4L1Q3SXM0 396 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 UBXN11Q5T124 520 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 EPM2AIP1Q7L775 607 aaPredicted RBP16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 NPAS4Q8IUM7 802 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 SPATA20Q8TB22 786 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 GPT2Q8TD30 523 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 ACCSQ96QU6 501 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 TARS2Q9BW92 718 aaKnown RBP16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 FGFBP2Q9BYJ0 223 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 GTPBP4Q9BZE4 634 aaKnown RBP16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 TRIM6Q9C030 488 aaPredicted RBP16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 NUP62CLQ9H1M0 184 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 CLSTN2Q9H4D0 955 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 ELAC1Q9H777 363 aaKnown RBP16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 TMEM206Q9H813 350 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 TMEM161AQ9NX61 479 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 PCDHA5Q9Y5H7 936 aa16.64■□□□□ 0.25
ATP6V1F-201ENST00000249289 ZNF623O75123 536 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 TOM1L1O75674 476 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 FAM189BP81408 668 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 BMT2Q1RMZ1 405 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 ZNF568Q3ZCX4 644 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 MPZL3Q6UWV2 235 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 ECHDC2Q86YB7 292 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 HERC6Q8IVU3 1022 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 HACE1Q8IYU2 909 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 KIAA0895Q8NCT3 520 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 GLIS3Q8NEA6 775 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 TOP1MTQ969P6 601 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 PTPRHQ9HD43 1115 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 SLC39A2Q9NP94 309 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 USP20Q9Y2K6 914 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 PCDHB2Q9Y5E7 798 aa16.63■□□□□ 0.25
ATP6V1F-201ENST00000249289 HOXA2O43364 376 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 PRPF6O94906 941 aaKnown RBP16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 GJB5O95377 273 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 NPTXRO95502 500 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 EOMESO95936 686 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 PROZP22891 400 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 STK4Q13043 487 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 EEF1DP3Q658K8 133 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 ZNF598Q86UK7 904 aaKnown RBP16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 SYCP3Q8IZU3 236 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 CRIPAKQ8N1N5 446 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 ZNF507Q8TCN5 953 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 PGBD4Q96DM1 585 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 TCHPQ9BT92 498 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 EIF2AQ9BY44 585 aaKnown RBP16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 ANKFY1Q9P2R3 1169 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 IPPQ9Y573 584 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 PCDHB7Q9Y5E2 793 aa16.62■□□□□ 0.25
ATP6V1F-201ENST00000249289 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 ABLIM1O14639 778 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 CLDN3O15551 220 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 KIF20AO95235 890 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 MCF2P10911 925 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 ATF7P17544 494 aaPredicted RBP16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 KCNA1Q09470 495 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 NOLC1Q14978 699 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 CAMK4Q16566 473 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 MRPL10Q7Z7H8 261 aaKnown RBP16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 SCFD1Q8WVM8 642 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 RSPH1Q8WYR4 309 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 ERCC4Q92889 916 aaPredicted RBP16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 CDT1Q9H211 546 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 COL4A6Q14031 1691 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 ZMYM2Q9UBW7 1377 aa16.61■□□□□ 0.25
ATP6V1F-201ENST00000249289 UPP2O95045 317 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 MCL1Q07820 350 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 LRIT3Q3SXY7 679 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 ZNF658Q5TYW1 1059 aaPredicted RBP16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 SLFN12LQ6IEE8 588 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 SLC39A4Q6P5W5 647 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 RNF169Q8NCN4 708 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 SMG8Q8ND04 991 aaKnown RBP16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 ZBED2Q9BTP6 218 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 GBP3Q9H0R5 595 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 NXF3Q9H4D5 531 aaKnown RBP16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 KIAA1468Q9P260 1216 aa16.6■□□□□ 0.25
ATP6V1F-201ENST00000249289 ITGA4P13612 1032 aa16.59■□□□□ 0.25
ATP6V1F-201ENST00000249289 MATR3P43243 847 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATP6V1F-201ENST00000249289 SNRPFP62306 86 aaKnown RBP16.59■□□□□ 0.25
ATP6V1F-201ENST00000249289 HTRA4P83105 476 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms