RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.81
SMPD3-201ENST00000219334 HSD17B4P51659 736 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 ST8SIA6P61647 398 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 HABP4Q5JVS0 413 aaKnown RBP20.14■□□□□ 0.81
SMPD3-201ENST00000219334 ZNF34Q8IZ26 560 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 MAML1Q92585 1016 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 VCPKMTQ9H867 229 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 CAMTA2O94983 1202 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 SLC8A1P32418 973 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 CACNB2Q08289 660 aaPredicted RBP20.13■□□□□ 0.81
SMPD3-201ENST00000219334 WDR72Q3MJ13 1102 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 APPL2Q8NEU8 664 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 CCDC138Q96M89 665 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 TRPC7Q9HCX4 862 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 RBP5P82980 135 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 SLC7A5Q01650 507 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 IFT88Q13099 833 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 SEMA3FQ13275 785 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 ANKRD13AQ8IZ07 590 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 NUDT12Q9BQG2 462 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 CPSF2Q9P2I0 782 aaKnown RBP20.13■□□□□ 0.81
SMPD3-201ENST00000219334 USP31Q70CQ4 1352 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 PP2D1A8MPX8 630 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 NNTQ13423 1086 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 RMDN1Q96DB5 314 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 EGFL8Q99944 293 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 UPF3AQ9H1J1 476 aaKnown RBP20.13■□□□□ 0.81
SMPD3-201ENST00000219334 AGAP1Q9UPQ3 857 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 SNX24Q9Y343 169 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 ZC3H4Q9UPT8 1303 aaKnown RBP20.13■□□□□ 0.81
SMPD3-201ENST00000219334 RPS6KA5O75582 802 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 FTLP02792 175 aaPredicted RBP20.13■□□□□ 0.81
SMPD3-201ENST00000219334 LCP1P13796 627 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 CAV1Q03135 178 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 TAP1Q03518 808 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 ALS2CLQ60I27 953 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 TAS2R42Q7RTR8 314 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 GAS2L3Q86XJ1 694 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 WDR75Q8IWA0 830 aaKnown RBP20.13■□□□□ 0.81
SMPD3-201ENST00000219334 ZC3H15Q8WU90 426 aaKnown RBP20.13■□□□□ 0.81
SMPD3-201ENST00000219334 VPS11Q9H270 941 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 PPP1R9AQ9ULJ8 1098 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 PFASO15067 1338 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 TRIM49P0CI25 452 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 TRIM49CP0CI26 452 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 PDIA5Q14554 519 aa20.13■□□□□ 0.81
SMPD3-201ENST00000219334 DPEP1P16444 411 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 TMPRSS15P98073 1019 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 PDE1CQ14123 709 aaPredicted RBP20.12■□□□□ 0.81
SMPD3-201ENST00000219334 LINC00116Q8NCU8 138 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 OR6P1Q8NGX9 317 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 EPAS1Q99814 870 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 MYOZ2Q9NPC6 264 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 ZNF189O75820 626 aaPredicted RBP20.12■□□□□ 0.81
SMPD3-201ENST00000219334 GLE1Q53GS7 698 aaKnown RBP20.12■□□□□ 0.81
SMPD3-201ENST00000219334 SPATA17Q96L03 361 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 RGL1Q9NZL6 768 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 TULP4Q9NRJ4 1543 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 TET3O43151 1660 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 SBK1Q52WX2 424 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 ZNF746Q6NUN9 644 aaPredicted RBP20.12■□□□□ 0.81
SMPD3-201ENST00000219334 RHOT1Q8IXI2 618 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 PBXIP1Q96AQ6 731 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 EHD2Q9NZN4 543 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 ITM2BQ9Y287 266 aa20.12■□□□□ 0.81
SMPD3-201ENST00000219334 SH3BGRP55822 239 aaPredicted RBP20.11■□□□□ 0.81
SMPD3-201ENST00000219334 KLHL38Q2WGJ6 581 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 GLB1LQ6UWU2 654 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 MARCH10Q8NA82 808 aaPredicted RBP20.11■□□□□ 0.81
SMPD3-201ENST00000219334 TTC17Q96AE7 1141 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 ABHD10Q9NUJ1 306 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 FBXW4P57775 412 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 STILQ15468 1287 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 PRAMEF18Q5VWM3 479 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 DDX53Q86TM3 631 aaKnown RBP20.11■□□□□ 0.81
SMPD3-201ENST00000219334 NDFIP2Q9NV92 336 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 SNX9Q9Y5X1 595 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 SEC31AO94979 1220 aaKnown RBP20.11■□□□□ 0.81
SMPD3-201ENST00000219334 LIG3P49916 1009 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 ROR1Q01973 937 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 THEMIS2Q5TEJ8 643 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 TMEM143Q96AN5 459 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 PACSIN2Q9UNF0 486 aaPredicted RBP20.11■□□□□ 0.81
SMPD3-201ENST00000219334 ANP32DO95626 131 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 COPS2P61201 443 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 ATP2C1P98194 919 aaPredicted RBP20.11■□□□□ 0.81
SMPD3-201ENST00000219334 FAM117BQ6P1L5 589 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 BARGINQ6ZT62 677 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 RAB42Q8N4Z0 105 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 SRBD1Q8N5C6 995 aaKnown RBP20.11■□□□□ 0.81
SMPD3-201ENST00000219334 MORC4Q8TE76 937 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 KLHL29Q96CT2 875 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 DEFB129Q9H1M3 183 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 TXLNGQ9NUQ3 528 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 PARVAQ9NVD7 372 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 C1orf167Q5SNV9 1468 aa20.11■□□□□ 0.81
SMPD3-201ENST00000219334 CCDC151A5D8V7 595 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 ZNF197O14709 1029 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 HADHAP40939 763 aa20.1■□□□□ 0.81
SMPD3-201ENST00000219334 GFPT1Q06210 699 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms