RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 HSPBP1Q9NZL4 362 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 NAGPAQ9UK23 515 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 SSU72P8A0A1W2PR75 194 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 CCDC151A5D8V7 595 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 LRRIQ3A6PVS8 624 aaPredicted RBP10.79□□□□□ -0.68
USP11-201ENST00000218348 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
USP11-201ENST00000218348 IBSPP21815 317 aaPredicted RBP10.79□□□□□ -0.68
USP11-201ENST00000218348 CCND2P30279 289 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 MARSP56192 900 aaKnown RBP10.79□□□□□ -0.68
USP11-201ENST00000218348 GHRHRQ02643 423 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 BFSP1Q12934 665 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 MKRN4PQ13434 485 aaPredicted RBP10.79□□□□□ -0.68
USP11-201ENST00000218348 TRADDQ15628 312 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 RGMBQ6NW40 437 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 B3GNT9Q6UX72 402 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 SPATA4Q8NEY3 305 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 KMT5AQ9NQR1 393 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 PLXNA1Q9UIW2 1896 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 DDX3XO00571 662 aaKnown RBP eCLIP10.79□□□□□ -0.68
USP11-201ENST00000218348 CEP104O60308 925 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 PAFAH1B1P43034 410 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 NPTX2P47972 431 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 TM4SF4P48230 202 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 PSMC5P62195 406 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 C2CD6Q53TS8 623 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 POMGNT1Q8WZA1 660 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 PPP1R16BQ96T49 567 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 TBC1D22BQ9NU19 505 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 VPS18Q9P253 973 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
USP11-201ENST00000218348 GRID2IPA4D2P6 1211 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 SPDYE16A6NNV3 312 aaPredicted RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 IGF2BP3O00425 579 aaKnown RBP eCLIP10.78□□□□□ -0.68
USP11-201ENST00000218348 HNRNPDLO14979 420 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 ERLIN1O75477 346 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 ADRB2P07550 413 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 PLS3P13797 630 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 DSG3P32926 999 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 COPB2P35606 906 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 VAMP7P51809 220 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 CASP8Q14790 479 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 BMT2Q1RMZ1 405 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 RINLQ6ZS11 566 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 DAAM2Q86T65 1068 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 VSIG10LQ86VR7 867 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 ATL2Q8NHH9 583 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 NSUN6Q8TEA1 469 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 DHX38Q92620 1227 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 CFHR5Q9BXR6 569 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 TEX13BQ9BXU2 312 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 PLCB1Q9NQ66 1216 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 CYP39A1Q9NYL5 469 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 ODF2LQ9ULJ1 636 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 AGTPBP1Q9UPW5 1226 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 RPTORQ8N122 1335 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 ATP2A1O14983 1001 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 EIF3DO15371 548 aaKnown RBP eCLIP10.78□□□□□ -0.68
USP11-201ENST00000218348 ZNF131P52739 623 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 DPY19L2P1Q6NXN4 242 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 DNAJC5GQ8N7S2 189 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 ACCSQ96QU6 501 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 KRT12Q99456 494 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 FAM213AQ9BRX8 229 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 AIPL1Q9NZN9 384 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 G3BP2Q9UN86 482 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 CSADQ9Y600 493 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 ZNFX1Q9P2E3 1918 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 TPD52L2O43399 206 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 ACOT2P49753 483 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 GALCP54803 685 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 HUNKP57058 714 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 ACTR2P61160 394 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 PRKCEQ02156 737 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 CKAP4Q07065 602 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 DMP1Q13316 513 aaPredicted RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 BRD3Q15059 726 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 NAB2Q15742 525 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 TRIM50Q86XT4 487 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 LNX1Q8TBB1 728 aaPredicted RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 PAIP2Q9BPZ3 127 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 MOV10L1Q9BXT6 1211 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 JPH1Q9HDC5 661 aaPredicted RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 LUC7LQ9NQ29 371 aaKnown RBP10.78□□□□□ -0.68
USP11-201ENST00000218348 ANKFY1Q9P2R3 1169 aa10.78□□□□□ -0.68
USP11-201ENST00000218348 MYPNQ86TC9 1320 aa10.77□□□□□ -0.68
USP11-201ENST00000218348 LRRIQ4A6NIV6 560 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 F8VZ95 297 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 TNFAIP3P21580 790 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 CNGA1P29973 690 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 MNAT1P51948 309 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
USP11-201ENST00000218348 SND1Q7KZF4 910 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP11-201ENST00000218348 ANKRD23Q86SG2 305 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 CDR2LQ86X02 465 aaPredicted RBP10.77□□□□□ -0.69
USP11-201ENST00000218348 XXYLT1Q8NBI6 393 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 TAF4BQ92750 862 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 ZBTB45Q96K62 511 aaPredicted RBP10.77□□□□□ -0.69
USP11-201ENST00000218348 KDM4CQ9H3R0 1056 aa10.77□□□□□ -0.69
USP11-201ENST00000218348 RABEP2Q9H5N1 569 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms