RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Tmem117Q8BH18 514 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Ints9Q8K114 658 aaKnown RBP12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Col23a1Q8K4G2 532 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Nudt12Q9DCN1 462 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Mageb2A2AHM0 380 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Ttll6A4Q9E8 822 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Speer2E9Q9U2 264 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cyp4f40G3UW81 524 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Vmn2r77L7N2B7 854 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Pik3r1P26450 724 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Epb41l4aP52963 686 aa12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Mrpl11Q9CQF0 192 aaKnown RBP12.96□□□□□ -0.33
Herc4-208ENSMUST00000219577 Tfe3Q64092 572 aaKnown RBP12.96□□□□□ -0.34
Herc4-208ENSMUST00000219577 Krt77Q6IFZ6 572 aa12.96□□□□□ -0.34
Herc4-208ENSMUST00000219577 Tmem120aQ8C1E7 343 aa12.96□□□□□ -0.34
Herc4-208ENSMUST00000219577 Actl9Q8CG27 415 aa12.96□□□□□ -0.34
Herc4-208ENSMUST00000219577 Zcchc8Q9CYA6 709 aaKnown RBP12.96□□□□□ -0.34
Herc4-208ENSMUST00000219577 Ubiad1Q9DC60 336 aa12.96□□□□□ -0.34
Herc4-208ENSMUST00000219577 Xab2Q9DCD2 855 aaKnown RBP12.96□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pcsk1nQ9QXV0 258 aa12.96□□□□□ -0.34
Herc4-208ENSMUST00000219577 Serpinb6eI7HJI3 429 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Zfp42P22227 288 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Sema3eP70275 775 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Nsun2Q1HFZ0 757 aaKnown RBP12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Zfp957Q3UT76 567 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Dzip3Q7TPV2 1204 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 PodnQ7TQ62 611 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Tjp3Q9QXY1 905 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Extl3Q9WVL6 918 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Osbpl7A2A716 963 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Cacna2d1O08532 1103 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 UncxO08934 530 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pja1O55176 578 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 AfmO89020 608 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Rrm1P07742 792 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 NsfP46460 744 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Psmc4P54775 418 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Odr4Q4PJX1 447 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Vps36Q91XD6 386 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Fkbp6Q91XW8 327 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pcdha5Q91Y15 934 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Cuedc2Q9CXX9 284 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Zfp266E9Q2S7 604 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Gm3182K7N6T8 263 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Smad1P70340 465 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Gm2163Q6PCY5 473 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Drd5Q8BLD9 478 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pcdhb12Q91Y07 789 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Ifi202Q9R002 445 aa12.95□□□□□ -0.34
Herc4-208ENSMUST00000219577 Ephb4P54761 987 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Slc20a2Q80UP8 656 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Ccdc15Q8C9M2 810 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 PigoQ9JJI6 1093 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pdzd4Q9QY39 772 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Fem1bQ9Z2G0 627 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 CtshP49935 333 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Cdca2Q14B71 982 aaKnown RBP12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Yipf3Q3UDR8 347 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Slc10a5Q5PT54 434 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Tbc1d1Q60949 1255 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Tdpoz4Q6YCH2 370 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Baiap3Q80TT2 1134 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Trappc12Q8K2L8 797 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Nop56Q9D6Z1 580 aaKnown RBP12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Llcfc1Q9D9P8 108 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 PappaQ8R4K8 1624 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Cep85lA0A1W2P884 806 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Gimd1E9PW74 217 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Diaph2O70566 1098 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Hspa9P38647 679 aaKnown RBP12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Tnni3P48787 211 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Wnk4Q80UE6 1222 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pls3Q99K51 630 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 4930550L24RikQ99PA7 320 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Stat2Q9WVL2 923 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Cfap70D3YVL2 1141 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Exoc4O35382 975 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Fcer2P20693 331 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Pid1Q3UBG2 217 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Tgfbrap1Q3UR70 860 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Ccdc125Q5U465 500 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Gbp4Q61107 620 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Sema5aQ62217 1077 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Crybg3Q80W49 1005 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Aldh5a1Q8BWF0 523 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Usp37Q8C0R0 979 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Prmt2Q9R144 448 aa12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Rfwd2Q9R1A8 733 aaKnown RBP12.94□□□□□ -0.34
Herc4-208ENSMUST00000219577 Gon4lQ9DB00 2260 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Klra1P20937 262 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 DeptorQ570Y9 409 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Sh3gl2Q62420 352 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Srd5a1Q68FF9 255 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Xpnpep1Q6P1B1 623 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Siglec10Q80ZE3 688 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Sppl3Q9CUS9 384 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Serpina9Q9D7D2 418 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 H2-OaQ9QWV1 250 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Col1a1P11087 1453 aa12.93□□□□□ -0.34
Herc4-208ENSMUST00000219577 Eif3dO70194 548 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms