RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Zscan25B2RX31 543 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 DgkkE9Q7N4 1118 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ap1b1O35643 943 aaKnown RBP9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cbfa2t2O70374 594 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cd72P21855 354 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Tpm2P58774 284 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Adcy5P84309 1262 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Edem3Q2HXL6 931 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Igbp1Q61249 340 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Slc26a2Q62273 739 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Rhbdf1Q6PIX5 856 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Sh3d21Q7TSG5 549 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ints8Q80V86 995 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 D130040H23RikQ8BII3 405 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Cep95Q8BVV7 827 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 OgtQ8CGY8 1046 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Smtnl1Q99LM3 459 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Ccdc96Q9CR92 584 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Mageb3Q9D2H4 330 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Mmel1Q9JLI3 765 aa9.65□□□□□ -0.86
Ccdc28a-201ENSMUST00000052648 Myo16Q5DU14 1919 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm6133B2RY53 190 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 GcP21614 476 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Xrcc6P23475 608 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Hps5P59438 1126 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 EregQ61521 162 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Krt31Q61765 416 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 FAM120AQ6A0A9 1112 aaKnown RBP9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Znf579Q80VM4 562 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ankrd24Q80VM7 985 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Usp38Q8BW70 1042 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ago3Q8CJF9 860 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Pcdha7Q91Y13 937 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ccdc43Q9CR29 222 aaKnown RBP9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Usp29Q9ES63 869 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 AmfrQ9R049 643 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Scnn1bQ9WU38 638 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Arih2Q9Z1K6 492 aa9.65□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Etnk2A7MCT6 385 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 1700064H15RikD3Z4D4 81 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Vmn2r17E9PYF5 849 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Trap1aP19473 224 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gfpt1P47856 697 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Mfsd14aP70187 490 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Dcaf17Q3TUL7 519 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Hhla1Q3TYV2 514 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gse1Q3U3C9 1213 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Parp3Q3ULW8 533 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 P3h1Q3V1T4 739 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tpm4Q6IRU2 248 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Fhod1Q6P9Q4 1197 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Olfr392Q7TRX6 312 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tspan18Q80WR1 248 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rpp40Q8R1F9 363 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Clstn3Q99JH7 956 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Micu3Q9CTY5 523 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 4933402E13RikQ9D4D2 429 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Cmtr1Q9DBC3 837 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ndst4Q9EQW8 872 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Dnajb7Q9QYI8 312 aa9.64□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Olfr456B2RT27 312 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ugt1a8D3Z748 530 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Ugt1a10E9PXN7 530 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Chrna9G3X8Z7 479 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Il1rapl1P59823 695 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 SlmapQ3URD3 845 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Abi3bpQ59IW6 1179 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 PoliQ6R3M4 717 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Fgd5Q80UZ0 1219 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rab11fip4Q8BQP8 635 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Phka2Q8BWJ3 1235 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Rapgef5Q8C0Q9 814 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Olfr458Q8VF80 313 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Olfr457Q8VGP5 313 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Col26a1Q91VF6 440 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Trpv6Q91WD2 767 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Cst12Q9DAN8 128 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 SelenooQ9DBC0 667 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 DgkeQ9R1C6 564 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Spata31d1aE9QA35 1336 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Scn1aA2APX8 2009 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Vmn2r63E9Q0K5 859 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm9268E9Q0M3 861 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Zfp882E9Q4R4 555 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gm17535J3KMR8 224 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Vmn2r62K7N712 859 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Kcnh2O35219 1162 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Fgd3O88842 733 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Sox5P35710 763 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Scarf2P59222 833 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 VegfaQ00731 214 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Zfp781Q0P5U5 243 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Col19a1Q0VF58 1136 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Znf827Q505G8 1078 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Tmem202Q80W35 275 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Slu7Q8BHJ9 585 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Gpr180Q8BPS4 441 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Kct2Q8K201 259 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 CbsQ91WT9 561 aa9.63□□□□□ -0.87
Ccdc28a-201ENSMUST00000052648 Trim54Q9ERP3 366 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms