RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 TVP15Q03860 143 aa0.03□□□□□ -2.4
snR55snR55 ARC18Q05933 178 aaKnown RBP0.03□□□□□ -2.4
snR55snR55 SGA1P08019 549 aa0.02□□□□□ -2.41
snR55snR55 CDC13P32797 924 aaKnown RBP0.02□□□□□ -2.41
snR55snR55 MYO3P36006 1272 aa0.02□□□□□ -2.41
snR55snR55 YBR062CP38239 180 aa0.02□□□□□ -2.41
snR55snR55 MBA1P38300 278 aa0.02□□□□□ -2.41
snR55snR55 YHL026CP38740 315 aa0.02□□□□□ -2.41
snR55snR55 SPL2P38839 148 aa0.02□□□□□ -2.41
snR55snR55 YFL064CP43540 174 aa0.02□□□□□ -2.41
snR55snR55 NNT1Q05874 261 aa0.02□□□□□ -2.41
snR55snR55 VIK1Q12045 647 aa0.02□□□□□ -2.41
snR55snR55 SPE3Q12074 293 aaKnown RBP0.02□□□□□ -2.41
snR55snR55 ATG5Q12380 294 aa0.02□□□□□ -2.41
snR55snR55 DCC1P25559 380 aa0.01□□□□□ -2.41
snR55snR55 KRE6P32486 720 aa0.01□□□□□ -2.41
snR55snR55 PEX32P38292 413 aa0.01□□□□□ -2.41
snR55snR55 SUR2P38992 349 aa0.01□□□□□ -2.41
snR55snR55 PEP8P40335 379 aa0.01□□□□□ -2.41
snR55snR55 TRM44Q02648 567 aaKnown RBP0.01□□□□□ -2.41
snR55snR55 MZM1Q03429 123 aaPredicted RBP0.01□□□□□ -2.41
snR55snR55 STE23Q06010 1027 aa0.01□□□□□ -2.41
snR55snR55 YPL278CQ08990 100 aa0.01□□□□□ -2.41
snR55snR55 MRPL6P32904 214 aa0□□□□□ -2.41
snR55snR55 AVT6P40074 448 aa0□□□□□ -2.41
snR55snR55 RPL10P41805 221 aaKnown RBP0□□□□□ -2.41
snR55snR55 YHC3P47040 408 aa0□□□□□ -2.41
snR55snR55 YDL144CQ07589 356 aa0□□□□□ -2.41
snR55snR55 RAS2P01120 322 aaKnown RBP-0.01□□□□□ -2.41
snR55snR55 TOM40P23644 387 aaKnown RBP-0.01□□□□□ -2.41
snR55snR55 YBL028CP38202 106 aa-0.01□□□□□ -2.41
snR55snR55 PES4P39684 611 aa-0.01□□□□□ -2.41
snR55snR55 YIL089WP40500 205 aa-0.01□□□□□ -2.41
snR55snR55 BUD27P43573 796 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
snR55snR55 YJL118WP47022 219 aa-0.01□□□□□ -2.41
snR55snR55 YLR012CQ07927 99 aa-0.01□□□□□ -2.41
snR55snR55 INH1P01097 85 aa-0.02□□□□□ -2.41
snR55snR55 RAD7P06779 565 aa-0.02□□□□□ -2.41
snR55snR55 SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.02□□□□□ -2.41not detected
snR55snR55 EFM4P40516 257 aa-0.02□□□□□ -2.41
snR55snR55 CIS3P47001 227 aa-0.02□□□□□ -2.41
snR55snR55 PRP24P49960 444 aaKnown RBP-0.02□□□□□ -2.41
snR55snR55 GYL1Q04322 720 aa-0.02□□□□□ -2.41
snR55snR55 NOT5Q12514 560 aaPredicted RBP-0.02□□□□□ -2.41
snR55snR55 MRPL3P36516 390 aa-0.03□□□□□ -2.41
snR55snR55 SRB7P47822 140 aa-0.03□□□□□ -2.41
snR55snR55 RPL37AP49166 88 aaKnown RBP-0.03□□□□□ -2.41
snR55snR55 YFH1Q07540 174 aa-0.03□□□□□ -2.41
snR55snR55 NUP157P40064 1391 aaKnown RBP-0.04□□□□□ -2.42
snR55snR55 HXT2P23585 541 aa-0.04□□□□□ -2.42
snR55snR55 YGL010WP25338 174 aa-0.04□□□□□ -2.42
snR55snR55 IMP1P28627 190 aa-0.04□□□□□ -2.42
snR55snR55 MEI5P32489 222 aa-0.04□□□□□ -2.42
snR55snR55 GCG1P32656 232 aaKnown RBP-0.04□□□□□ -2.42
snR55snR55 YBR220CP38318 560 aa-0.04□□□□□ -2.42
snR55snR55 YHR122WP38829 231 aa-0.04□□□□□ -2.42
snR55snR55 SOP4P39543 234 aaPredicted RBP-0.04□□□□□ -2.42
snR55snR55 YMR134WP40207 237 aa-0.04□□□□□ -2.42
snR55snR55 GON7P46984 123 aa-0.04□□□□□ -2.42
snR55snR55 YGL114WP53134 725 aa-0.04□□□□□ -2.42
snR55snR55 SWT21P53873 357 aaPredicted RBP-0.04□□□□□ -2.42
snR55snR55 YNL143CP53908 130 aa-0.04□□□□□ -2.42
snR55snR55 LAG2Q92325 660 aa-0.04□□□□□ -2.42
snR55snR55 MAS1P10507 462 aa-0.05□□□□□ -2.42
snR55snR55 CIN8P27895 1000 aa-0.05□□□□□ -2.42
snR55snR55 TIF34P40217 347 aaKnown RBP-0.05□□□□□ -2.42
snR55snR55 DAD3P69850 94 aa-0.05□□□□□ -2.42
snR55snR55 CAB5Q03941 241 aa-0.05□□□□□ -2.42
snR55snR55 YLL007CQ07799 665 aa-0.05□□□□□ -2.42
snR55snR55 YBL112CQ3E7Y4 105 aa-0.05□□□□□ -2.42
snR55snR55 POX1P13711 748 aa-0.06□□□□□ -2.42
snR55snR55 THR4P16120 514 aaKnown RBP-0.06□□□□□ -2.42
snR55snR55 ERD1P16151 362 aa-0.06□□□□□ -2.42
snR55snR55 SFC1P33303 322 aa-0.06□□□□□ -2.42
snR55snR55 TPO5P36029 618 aa-0.06□□□□□ -2.42
snR55snR55 YFL040WP43562 540 aa-0.06□□□□□ -2.42
snR55snR55 PXR1P53335 271 aaPredicted RBP-0.06□□□□□ -2.42
snR55snR55 YMR114CQ04471 368 aaKnown RBP-0.06□□□□□ -2.42
snR55snR55 GLE1Q12315 538 aa-0.06□□□□□ -2.42
snR55snR55 PUT1P09368 476 aa-0.07□□□□□ -2.42
snR55snR55 FPR1P20081 114 aaKnown RBP-0.07□□□□□ -2.42
snR55snR55 RPL16BP26785 198 aaKnown RBP-0.07□□□□□ -2.42
snR55snR55 RPN12P32496 274 aa-0.07□□□□□ -2.42
snR55snR55 SCM4P32564 187 aa-0.07□□□□□ -2.42
snR55snR55 KDX1P36005 433 aa-0.07□□□□□ -2.42
snR55snR55 YPT32P51996 222 aaKnown RBP-0.07□□□□□ -2.42
snR55snR55 COG7P53195 279 aa-0.07□□□□□ -2.42
snR55snR55 AAH1P53909 347 aa-0.07□□□□□ -2.42
snR55snR55 MRS2Q01926 470 aa-0.07□□□□□ -2.42
snR55snR55 YLR446WQ06204 433 aa-0.07□□□□□ -2.42
snR55snR55 ISD11Q6Q560 94 aa-0.07□□□□□ -2.42
snR55snR55 RPL2AP0CX45 254 aaKnown RBP-0.08□□□□□ -2.42
snR55snR55 RPL2BP0CX46 254 aaKnown RBP-0.08□□□□□ -2.42
snR55snR55 OSM1P21375 501 aaKnown RBP-0.08□□□□□ -2.42
snR55snR55 HMX1P32339 317 aa-0.08□□□□□ -2.42
snR55snR55 CAT2P32796 670 aaKnown RBP-0.08□□□□□ -2.42
snR55snR55 VAB2P40003 282 aa-0.08□□□□□ -2.42
snR55snR55 HUA1P40325 198 aa-0.08□□□□□ -2.42
snR55snR55 RPL37BP51402 88 aaKnown RBP-0.08□□□□□ -2.42
snR55snR55 MLC1P53141 149 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 136.9 ms