RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 RDL2Q08742 149 aaKnown RBP0.04□□□□□ -2.4
snR49snR49 VIK1Q12045 647 aa0.04□□□□□ -2.4
snR49snR49 SFG1Q12507 346 aa0.04□□□□□ -2.4
snR49snR49 YBL028CP38202 106 aa0.03□□□□□ -2.4
snR49snR49 SUR2P38992 349 aa0.03□□□□□ -2.4
snR49snR49 YIL012WP40551 113 aa0.03□□□□□ -2.4
snR49snR49 TPN1P53099 579 aa0.03□□□□□ -2.4
snR49snR49 TRM44Q02648 567 aaKnown RBP0.03□□□□□ -2.4
snR49snR49 YPL278CQ08990 100 aa0.03□□□□□ -2.4
snR49snR49 UBR2Q07963 1872 aa0.02□□□□□ -2.41
snR49snR49 YCR025CP25352 136 aa0.02□□□□□ -2.41
snR49snR49 MRPL6P32904 214 aa0.02□□□□□ -2.41
snR49snR49 MYO3P36006 1272 aa0.02□□□□□ -2.41
snR49snR49 GPX1P36014 167 aa0.02□□□□□ -2.41
snR49snR49 YHL026CP38740 315 aa0.02□□□□□ -2.41
snR49snR49 PES4P39684 611 aa0.02□□□□□ -2.41
snR49snR49 PEP8P40335 379 aa0.02□□□□□ -2.41
snR49snR49 YJL016WP47072 561 aa0.02□□□□□ -2.41
snR49snR49 MZM1Q03429 123 aaPredicted RBP0.02□□□□□ -2.41
snR49snR49 SPE3Q12074 293 aaKnown RBP0.02□□□□□ -2.41
snR49snR49 ATG5Q12380 294 aa0.02□□□□□ -2.41
snR49snR49 DCC1P25559 380 aa0.01□□□□□ -2.41
snR49snR49 GYL1Q04322 720 aa0.01□□□□□ -2.41
snR49snR49 INH1P01097 85 aa0□□□□□ -2.41
snR49snR49 KRE6P32486 720 aa0□□□□□ -2.41
snR49snR49 PAN1P32521 1480 aa0□□□□□ -2.41
snR49snR49 BUD27P43573 796 aaKnown RBP RIP-Chip data0□□□□□ -2.41not detected
snR49snR49 YHC3P47040 408 aa0□□□□□ -2.41
snR49snR49 SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
snR49snR49 YBR062CP38239 180 aa-0.01□□□□□ -2.41
snR49snR49 PEX32P38292 413 aa-0.01□□□□□ -2.41
snR49snR49 AVT6P40074 448 aa-0.01□□□□□ -2.41
snR49snR49 YJL118WP47022 219 aa-0.01□□□□□ -2.41
snR49snR49 RPL37AP49166 88 aaKnown RBP-0.01□□□□□ -2.41
snR49snR49 PRP24P49960 444 aaKnown RBP-0.01□□□□□ -2.41
snR49snR49 STE23Q06010 1027 aa-0.01□□□□□ -2.41
snR49snR49 YDL144CQ07589 356 aa-0.01□□□□□ -2.41
snR49snR49 TOM40P23644 387 aaKnown RBP-0.02□□□□□ -2.41
snR49snR49 GCG1P32656 232 aaKnown RBP-0.02□□□□□ -2.41
snR49snR49 CIS3P47001 227 aa-0.02□□□□□ -2.41
snR49snR49 YLR012CQ07927 99 aa-0.02□□□□□ -2.41
snR49snR49 ERD1P16151 362 aa-0.03□□□□□ -2.41
snR49snR49 HXT2P23585 541 aa-0.03□□□□□ -2.41
snR49snR49 IMP1P28627 190 aa-0.03□□□□□ -2.41
snR49snR49 MEI5P32489 222 aa-0.03□□□□□ -2.41
snR49snR49 MRPL3P36516 390 aa-0.03□□□□□ -2.41
snR49snR49 EFM4P40516 257 aa-0.03□□□□□ -2.41
snR49snR49 SRB7P47822 140 aa-0.03□□□□□ -2.41
snR49snR49 YGL114WP53134 725 aa-0.03□□□□□ -2.41
snR49snR49 SWT21P53873 357 aaPredicted RBP-0.03□□□□□ -2.41
snR49snR49 YFH1Q07540 174 aa-0.03□□□□□ -2.41
snR49snR49 NUP157P40064 1391 aaKnown RBP-0.04□□□□□ -2.42
snR49snR49 RAS2P01120 322 aaKnown RBP-0.04□□□□□ -2.42
snR49snR49 RAD7P06779 565 aa-0.04□□□□□ -2.42
snR49snR49 YGL010WP25338 174 aa-0.04□□□□□ -2.42
snR49snR49 SFC1P33303 322 aa-0.04□□□□□ -2.42
snR49snR49 YIL089WP40500 205 aa-0.04□□□□□ -2.42
snR49snR49 GON7P46984 123 aa-0.04□□□□□ -2.42
snR49snR49 CAB5Q03941 241 aa-0.04□□□□□ -2.42
snR49snR49 YLL007CQ07799 665 aa-0.04□□□□□ -2.42
snR49snR49 GLE1Q12315 538 aa-0.04□□□□□ -2.42
snR49snR49 NOT5Q12514 560 aaPredicted RBP-0.04□□□□□ -2.42
snR49snR49 MAS1P10507 462 aa-0.05□□□□□ -2.42
snR49snR49 FPR1P20081 114 aaKnown RBP-0.05□□□□□ -2.42
snR49snR49 RPL16BP26785 198 aaKnown RBP-0.05□□□□□ -2.42
snR49snR49 CAT2P32796 670 aaKnown RBP-0.05□□□□□ -2.42
snR49snR49 YBR220CP38318 560 aa-0.05□□□□□ -2.42
snR49snR49 SOP4P39543 234 aaPredicted RBP-0.05□□□□□ -2.42
snR49snR49 YMR134WP40207 237 aa-0.05□□□□□ -2.42
snR49snR49 RPL37BP51402 88 aaKnown RBP-0.05□□□□□ -2.42
snR49snR49 LAG2Q92325 660 aa-0.05□□□□□ -2.42
snR49snR49 PUT1P09368 476 aa-0.06□□□□□ -2.42
snR49snR49 THR4P16120 514 aaKnown RBP-0.06□□□□□ -2.42
snR49snR49 CIN8P27895 1000 aa-0.06□□□□□ -2.42
snR49snR49 YHR122WP38829 231 aa-0.06□□□□□ -2.42
snR49snR49 TIF34P40217 347 aaKnown RBP-0.06□□□□□ -2.42
snR49snR49 PXR1P53335 271 aaPredicted RBP-0.06□□□□□ -2.42
snR49snR49 YNL143CP53908 130 aa-0.06□□□□□ -2.42
snR49snR49 DAD3P69850 94 aa-0.06□□□□□ -2.42
snR49snR49 MRS2Q01926 470 aa-0.06□□□□□ -2.42
snR49snR49 YMR114CQ04471 368 aaKnown RBP-0.06□□□□□ -2.42
snR49snR49 YBL112CQ3E7Y4 105 aa-0.06□□□□□ -2.42
snR49snR49 ISD11Q6Q560 94 aa-0.06□□□□□ -2.42
snR49snR49 OSM1P21375 501 aaKnown RBP-0.07□□□□□ -2.42
snR49snR49 HMX1P32339 317 aa-0.07□□□□□ -2.42
snR49snR49 RPN12P32496 274 aa-0.07□□□□□ -2.42
snR49snR49 SCM4P32564 187 aa-0.07□□□□□ -2.42
snR49snR49 TPO5P36029 618 aa-0.07□□□□□ -2.42
snR49snR49 KRE29P40026 464 aa-0.07□□□□□ -2.42
snR49snR49 MLC1P53141 149 aa-0.07□□□□□ -2.42
snR49snR49 COG7P53195 279 aa-0.07□□□□□ -2.42
snR49snR49 YLR446WQ06204 433 aa-0.07□□□□□ -2.42
snR49snR49 DCN1Q12395 269 aa-0.07□□□□□ -2.42
snR49snR49 RBK1P25332 333 aa-0.08□□□□□ -2.42
snR49snR49 YNR068CP53754 272 aa-0.08□□□□□ -2.42
snR49snR49 AAH1P53909 347 aa-0.08□□□□□ -2.42
snR49snR49 YMR310CQ04867 317 aaPredicted RBP-0.08□□□□□ -2.42
snR49snR49 KDX1P36005 433 aa-0.09□□□□□ -2.42
snR49snR49 HUA1P40325 198 aa-0.09□□□□□ -2.42
snR49snR49 RPE1P46969 238 aa-0.09□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 109.4 ms