RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 VPH2P32341 215 aa-0.4□□□□□ -2.47
snR48snR48 NFU1P32860 256 aa-0.4□□□□□ -2.47
snR48snR48 BUD2P33314 1104 aa-0.4□□□□□ -2.47
snR48snR48 KDX1P36005 433 aa-0.4□□□□□ -2.47
snR48snR48 YBR219CP38317 127 aa-0.4□□□□□ -2.47
snR48snR48 YBR220CP38318 560 aa-0.4□□□□□ -2.47
snR48snR48 SUR2P38992 349 aa-0.4□□□□□ -2.47
snR48snR48 GON7P46984 123 aa-0.4□□□□□ -2.47
snR48snR48 NAT4Q04751 285 aa-0.4□□□□□ -2.47
snR48snR48 RRG1Q12167 365 aaPredicted RBP-0.4□□□□□ -2.47
snR48snR48 RPN5Q12250 445 aaKnown RBP-0.4□□□□□ -2.47
snR48snR48 DCN1Q12395 269 aa-0.4□□□□□ -2.47
snR48snR48 PRM4Q12498 284 aa-0.4□□□□□ -2.47
snR48snR48 PRP8P33334 2413 aaKnown RBP-0.4□□□□□ -2.47
snR48snR48 RAS2P01120 322 aaKnown RBP-0.41□□□□□ -2.48
snR48snR48 ERD1P16151 362 aa-0.41□□□□□ -2.48
snR48snR48 FUR1P18562 216 aaKnown RBP-0.41□□□□□ -2.48
snR48snR48 UTR1P21373 530 aa-0.41□□□□□ -2.48
snR48snR48 LTV1P34078 463 aa-0.41□□□□□ -2.48
snR48snR48 YBL028CP38202 106 aa-0.41□□□□□ -2.48
snR48snR48 VTC1P40046 129 aaRIP-Chip data-0.41□□□□□ -2.48not detected
snR48snR48 AVT6P40074 448 aa-0.41□□□□□ -2.48
snR48snR48 LCP5P40079 357 aaPredicted RBP-0.41□□□□□ -2.48
snR48snR48 OST3P48439 350 aa-0.41□□□□□ -2.48
snR48snR48 TPN1P53099 579 aa-0.41□□□□□ -2.48
snR48snR48 YPR078CQ06813 372 aa-0.41□□□□□ -2.48
snR48snR48 CSI2Q08054 341 aa-0.41□□□□□ -2.48
snR48snR48 SRN2Q99176 213 aa-0.41□□□□□ -2.48
snR48snR48 VAR1P02381 398 aa-0.42□□□□□ -2.48
snR48snR48 RAD1P06777 1100 aa-0.42□□□□□ -2.48
snR48snR48 RPL2AP0CX45 254 aaKnown RBP-0.42□□□□□ -2.48
snR48snR48 RPL2BP0CX46 254 aaKnown RBP-0.42□□□□□ -2.48
snR48snR48 YCR025CP25352 136 aa-0.42□□□□□ -2.48
snR48snR48 MXR2P25566 168 aa-0.42□□□□□ -2.48
snR48snR48 ERG9P29704 444 aa-0.42□□□□□ -2.48
snR48snR48 YFL064CP43540 174 aa-0.42□□□□□ -2.48
snR48snR48 LIF1P53150 421 aa-0.42□□□□□ -2.48
snR48snR48 SWT21P53873 357 aaPredicted RBP-0.42□□□□□ -2.48
snR48snR48 TSR2Q06672 205 aaKnown RBP-0.42□□□□□ -2.48
snR48snR48 YLL007CQ07799 665 aa-0.42□□□□□ -2.48
snR48snR48 GLE1Q12315 538 aa-0.42□□□□□ -2.48
snR48snR48 ATG5Q12380 294 aa-0.42□□□□□ -2.48
snR48snR48 SFG1Q12507 346 aa-0.42□□□□□ -2.48
snR48snR48 YEL009C-AA0A023PZF2 135 aa-0.43□□□□□ -2.48
snR48snR48 GAL7P08431 366 aa-0.43□□□□□ -2.48
snR48snR48 MEI5P32489 222 aa-0.43□□□□□ -2.48
snR48snR48 STE23Q06010 1027 aa-0.43□□□□□ -2.48
snR48snR48 RDL2Q08742 149 aaKnown RBP-0.43□□□□□ -2.48
snR48snR48 GPM3Q12326 303 aa-0.43□□□□□ -2.48
snR48snR48 RAD7P06779 565 aa-0.44□□□□□ -2.48
snR48snR48 GRR1P24814 1151 aa-0.44□□□□□ -2.48
snR48snR48 PSO2P30620 661 aa-0.44□□□□□ -2.48
snR48snR48 GPX1P36014 167 aa-0.44□□□□□ -2.48
snR48snR48 MRPL3P36516 390 aa-0.44□□□□□ -2.48
snR48snR48 PRM10P42946 383 aa-0.44□□□□□ -2.48
snR48snR48 RPE1P46969 238 aa-0.44□□□□□ -2.48
snR48snR48 AAH1P53909 347 aa-0.44□□□□□ -2.48
snR48snR48 DAD3P69850 94 aa-0.44□□□□□ -2.48
snR48snR48 RMT2Q03305 412 aa-0.44□□□□□ -2.48
snR48snR48 YMR114CQ04471 368 aaKnown RBP-0.44□□□□□ -2.48
snR48snR48 BUR2Q05949 395 aa-0.44□□□□□ -2.48
snR48snR48 MHT1Q12525 324 aa-0.44□□□□□ -2.48
snR48snR48 ISD11Q6Q560 94 aa-0.44□□□□□ -2.48
snR48snR48 MDH2P22133 377 aa-0.45□□□□□ -2.48
snR48snR48 TCD1P38756 429 aa-0.45□□□□□ -2.48
snR48snR48 KRE29P40026 464 aa-0.45□□□□□ -2.48
snR48snR48 SNX4P47057 423 aa-0.45□□□□□ -2.48
snR48snR48 MRS2Q01926 470 aa-0.45□□□□□ -2.48
snR48snR48 AIM45Q12480 344 aaKnown RBP-0.45□□□□□ -2.48
snR48snR48 FBA1P14540 359 aaKnown RBP-0.46□□□□□ -2.48
snR48snR48 TOM40P23644 387 aaKnown RBP-0.46□□□□□ -2.48
snR48snR48 SCM4P32564 187 aa-0.46□□□□□ -2.48
snR48snR48 YBR062CP38239 180 aa-0.46□□□□□ -2.48
snR48snR48 YHB1P39676 399 aaKnown RBP-0.46□□□□□ -2.48
snR48snR48 BMT5P40493 336 aa-0.46□□□□□ -2.48
snR48snR48 PRM15Q03262 622 aa-0.46□□□□□ -2.48
snR48snR48 YDL144CQ07589 356 aa-0.46□□□□□ -2.48
snR48snR48 RIO1Q12196 484 aaKnown RBP-0.46□□□□□ -2.48
snR48snR48 SCM3Q12334 223 aa-0.46□□□□□ -2.48
snR48snR48 LAG2Q92325 660 aa-0.46□□□□□ -2.48
snR48snR48 CPA1P07258 411 aaKnown RBP-0.47□□□□□ -2.48
snR48snR48 OSM1P21375 501 aaKnown RBP-0.47□□□□□ -2.48
snR48snR48 MLH1P38920 769 aa-0.47□□□□□ -2.48
snR48snR48 TIF34P40217 347 aaKnown RBP-0.47□□□□□ -2.48
snR48snR48 YHC3P47040 408 aa-0.47□□□□□ -2.48
snR48snR48 NSP1P14907 823 aaKnown RBP-0.48□□□□□ -2.49
snR48snR48 DCC1P25559 380 aa-0.48□□□□□ -2.49
snR48snR48 GCG1P32656 232 aaKnown RBP-0.48□□□□□ -2.49
snR48snR48 TPO5P36029 618 aa-0.48□□□□□ -2.49
snR48snR48 SPT8P38915 602 aa-0.48□□□□□ -2.49
snR48snR48 COG7P53195 279 aa-0.48□□□□□ -2.49
snR48snR48 YNR062CP53748 327 aa-0.48□□□□□ -2.49
snR48snR48 YNL143CP53908 130 aa-0.48□□□□□ -2.49
snR48snR48 GYL1Q04322 720 aa-0.48□□□□□ -2.49
snR48snR48 ECM18Q04623 453 aa-0.48□□□□□ -2.49
snR48snR48 DSF1P0CX08 502 aa-0.49□□□□□ -2.49
snR48snR48 YNR073CP0CX09 502 aa-0.49□□□□□ -2.49
snR48snR48 PDX1P16451 410 aa-0.49□□□□□ -2.49
snR48snR48 SCL1P21243 252 aaKnown RBP-0.49□□□□□ -2.49
snR48snR48 CIN8P27895 1000 aa-0.49□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms