RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YML133CQ03099 1374 aa-2.87□□□□□ -2.87
snR40snR40 YLL066CQ99208 1374 aa-2.87□□□□□ -2.87
snR40snR40 KRR1P25586 316 aaPredicted RBP-2.87□□□□□ -2.87
snR40snR40 OAC1P32332 324 aa-2.87□□□□□ -2.87
snR40snR40 MCM10P32354 571 aa-2.87□□□□□ -2.87
snR40snR40 SWI3P32591 825 aa-2.87□□□□□ -2.87
snR40snR40 SPT8P38915 602 aa-2.87□□□□□ -2.87
snR40snR40 HHY1P39982 102 aa-2.87□□□□□ -2.87
snR40snR40 YER079WP40052 210 aaKnown RBP-2.87□□□□□ -2.87
snR40snR40 TWF1P53250 332 aa-2.87□□□□□ -2.87
snR40snR40 ECM18Q04623 453 aa-2.87□□□□□ -2.87
snR40snR40 ENT1Q12518 454 aa-2.87□□□□□ -2.87
snR40snR40 CST26P38226 397 aa-2.88□□□□□ -2.87
snR40snR40 OCA5P38738 679 aa-2.88□□□□□ -2.87
snR40snR40 ATG7P38862 630 aa-2.88□□□□□ -2.87
snR40snR40 YNL320WP42840 284 aa-2.88□□□□□ -2.87
snR40snR40 ARO8P53090 500 aaKnown RBP-2.88□□□□□ -2.87
snR40snR40 LIF1P53150 421 aa-2.88□□□□□ -2.87
snR40snR40 FOL1P53848 824 aa-2.88□□□□□ -2.87
snR40snR40 DON1Q05610 365 aa-2.88□□□□□ -2.87
snR40snR40 VAM3Q12241 283 aa-2.88□□□□□ -2.87
snR40snR40 POL2P21951 2222 aaKnown RBP-2.88□□□□□ -2.87
snR40snR40 DFR1P07807 211 aaKnown RBP RIP-Chip data-2.89□□□□□ -2.87not detected
snR40snR40 PPH22P23595 377 aa-2.89□□□□□ -2.87
snR40snR40 RPC53P25441 422 aa-2.89□□□□□ -2.87
snR40snR40 FAA1P30624 700 aaKnown RBP-2.89□□□□□ -2.87
snR40snR40 YHR182WP38870 785 aa-2.89□□□□□ -2.87
snR40snR40 GLG2P47011 380 aa-2.89□□□□□ -2.87
snR40snR40 BLS1Q06071 122 aa-2.89□□□□□ -2.87
snR40snR40 NMD4Q12129 218 aa-2.89□□□□□ -2.87
snR40snR40 RPS3P05750 240 aaKnown RBP-2.9□□□□□ -2.87
snR40snR40 PDX1P16451 410 aa-2.9□□□□□ -2.87
snR40snR40 CHS3P29465 1165 aa-2.9□□□□□ -2.87
snR40snR40 FLX1P40464 311 aa-2.9□□□□□ -2.87
snR40snR40 CAK1P43568 368 aaPredicted RBP-2.9□□□□□ -2.87
snR40snR40 TAD2P47058 250 aa-2.9□□□□□ -2.87
snR40snR40 LSB1P53281 241 aa-2.9□□□□□ -2.87
snR40snR40 YGR219WP53307 113 aa-2.9□□□□□ -2.87
snR40snR40 RCE1Q03530 315 aa-2.9□□□□□ -2.87
snR40snR40 YMR310CQ04867 317 aaPredicted RBP-2.9□□□□□ -2.87
snR40snR40 SPH1Q06160 661 aa-2.9□□□□□ -2.87
snR40snR40 DIS3Q08162 1001 aaKnown RBP-2.9□□□□□ -2.87
snR40snR40 SIL1Q08199 421 aa-2.9□□□□□ -2.87
snR40snR40 DET1Q99288 334 aaKnown RBP-2.9□□□□□ -2.87
snR40snR40 COX3P00420 269 aa-2.91□□□□□ -2.88
snR40snR40 CLG1P35190 452 aa-2.91□□□□□ -2.88
snR40snR40 DRE2P36152 348 aa-2.91□□□□□ -2.88
snR40snR40 ADH5P38113 351 aaKnown RBP-2.91□□□□□ -2.88
snR40snR40 SIP3P38717 1229 aa-2.91□□□□□ -2.88
snR40snR40 YHL041WP38730 149 aa-2.91□□□□□ -2.88
snR40snR40 YAR064WP39563 99 aa-2.91□□□□□ -2.88
snR40snR40 FLC2P39719 783 aa-2.91□□□□□ -2.88
snR40snR40 AVT6P40074 448 aa-2.91□□□□□ -2.88
snR40snR40 MOB1P40484 314 aa-2.91□□□□□ -2.88
snR40snR40 KNH1P50112 268 aa-2.91□□□□□ -2.88
snR40snR40 FMS1P50264 508 aa-2.91□□□□□ -2.88
snR40snR40 SUB1P54000 292 aaKnown RBP-2.91□□□□□ -2.88
snR40snR40 CWC27Q02770 301 aa-2.91□□□□□ -2.88
snR40snR40 SAM4Q08985 325 aaKnown RBP-2.91□□□□□ -2.88
snR40snR40 YDL180WQ12301 547 aa-2.91□□□□□ -2.88
snR40snR40 YEL009C-AA0A023PZF2 135 aa-2.92□□□□□ -2.88
snR40snR40 ARF1P11076 181 aaKnown RBP-2.92□□□□□ -2.88
snR40snR40 BMH1P29311 267 aaKnown RBP-2.92□□□□□ -2.88
snR40snR40 DOA1P36037 715 aa-2.92□□□□□ -2.88
snR40snR40 CMC1P36064 111 aa-2.92□□□□□ -2.88
snR40snR40 SPP381P38282 291 aaPredicted RBP-2.92□□□□□ -2.88
snR40snR40 YHL049CP38722 271 aa-2.92□□□□□ -2.88
snR40snR40 RCY1P39531 840 aa-2.92□□□□□ -2.88
snR40snR40 SMD3P43321 101 aaKnown RBP-2.92□□□□□ -2.88
snR40snR40 FYV8P46949 817 aaKnown RBP-2.92□□□□□ -2.88
snR40snR40 TOS8P53147 276 aa-2.92□□□□□ -2.88
snR40snR40 IRC4Q03036 179 aa-2.92□□□□□ -2.88
snR40snR40 ERO1Q03103 563 aa-2.92□□□□□ -2.88
snR40snR40 URC2Q04411 772 aa-2.92□□□□□ -2.88
snR40snR40 ANT1Q06497 328 aa-2.92□□□□□ -2.88
snR40snR40 DCI1Q08558 271 aa-2.92□□□□□ -2.88
snR40snR40 YBL112CQ3E7Y4 105 aa-2.92□□□□□ -2.88
snR40snR40 YBR126W-AQ8TGU7 68 aa-2.92□□□□□ -2.88
snR40snR40 MPD2Q99316 277 aa-2.92□□□□□ -2.88
snR40snR40 Q0255P03881 472 aa-2.93□□□□□ -2.88
snR40snR40 GAL1P04385 528 aa-2.93□□□□□ -2.88
snR40snR40 PSO2P30620 661 aa-2.93□□□□□ -2.88
snR40snR40 NOC2P39744 710 aaKnown RBP-2.93□□□□□ -2.88
snR40snR40 JHD2P47156 728 aaPredicted RBP-2.93□□□□□ -2.88
snR40snR40 PEX31P53203 462 aa-2.93□□□□□ -2.88
snR40snR40 MET14Q02196 202 aa-2.93□□□□□ -2.88
snR40snR40 YPR013CQ12145 317 aa-2.93□□□□□ -2.88
snR40snR40 GDH2P33327 1092 aaKnown RBP-2.94□□□□□ -2.88
snR40snR40 YIL012WP40551 113 aa-2.94□□□□□ -2.88
snR40snR40 YFL064CP43540 174 aa-2.94□□□□□ -2.88
snR40snR40 YNR066CP53752 436 aa-2.94□□□□□ -2.88
snR40snR40 RPN9Q04062 393 aaKnown RBP-2.94□□□□□ -2.88
snR40snR40 SMP3Q04174 516 aa-2.94□□□□□ -2.88
snR40snR40 GRE1Q08969 168 aa-2.94□□□□□ -2.88
snR40snR40 RRI2Q12348 645 aa-2.94□□□□□ -2.88
snR40snR40 LAA1P39526 2014 aa-2.94□□□□□ -2.88
snR40snR40 RPL12AP0CX53 165 aaKnown RBP-2.95□□□□□ -2.88
snR40snR40 RPL12BP0CX54 165 aa-2.95□□□□□ -2.88
snR40snR40 MET8P15807 274 aa-2.95□□□□□ -2.88
snR40snR40 PET9P18239 318 aaKnown RBP-2.95□□□□□ -2.88
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms