RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	TY2B-B	Q12491	1770 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	YPR096C	O13587	100 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	MET2	P08465	486 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TAL1	P15019	335 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	MIG1	P27705	504 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	MEI5	P32489	222 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	VPH1	P32563	840 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	SDH4	P37298	181 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	SMC2	P38989	1170 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	BTT1	P40314	149 aa	Predicted RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	ECO1	P43605	281 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	ABZ2	Q03266	374 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	YDR286C	Q05530	114 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	YPL278C	Q08990	100 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	RGS2	Q99188	309 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	FIG2	P25653	1609 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	DRS2	P39524	1355 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-JR2	P47100	1755 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-ER2	Q03619	1755 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-MR1	Q04214	1755 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-MR2	Q04670	1755 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	FKS3	Q04952	1785 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-LR1	Q12088	1755 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-NL1	Q12112	1755 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-GR1	Q12141	1755 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-BL	Q12490	1755 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TY1B-DR3	Q99231	1755 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	CBP2	P03874	630 aa	Predicted RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	RPL18A	P0CX49	186 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	RPL18B	P0CX50	186 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	PRE7	P23724	241 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	ERG9	P29704	444 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	ALK2	P32789	676 aa	Predicted RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	SLM1	P40485	686 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	RCF1	Q03713	159 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	APC4	Q04601	652 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	RDL2	Q08742	149 aa	Known RBP	0.54	□□□□□ -2.32
SEC8	YPR055W	SKS1	Q12505	502 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	IQG1	Q12280	1495 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	GCN2	P15442	1659 aa		0.54	□□□□□ -2.32
SEC8	YPR055W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	KRE1	P17260	313 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	TKL2	P33315	681 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	GPX1	P36014	167 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	YKL162C	P36052	402 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	YPC1	P38298	316 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	ECM14	P38836	430 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	YIL054W	P40524	105 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	NAS2	P40555	220 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	SHE4	P51534	789 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	TAF6	P53040	516 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	SDS23	P53172	527 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	YNR066C	P53752	436 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	PDR16	P53860	351 aa	Known RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	GMC1	Q04399	608 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	SPH1	Q06160	661 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	MRX9	Q07349	420 aa	Known RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	YPL264C	Q08980	353 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	NUP170	P38181	1502 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	HSP82	P02829	709 aa	Known RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	INO2	P26798	304 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	YPS1	P32329	569 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	ARO4	P32449	370 aa	Known RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	SWI3	P32591	825 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	PEX32	P38292	413 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	EFM1	P38732	585 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	APE4	P38821	490 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	PIR5	P46999	287 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	ACT1	P60010	375 aa	Known RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	STE23	Q06010	1027 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	PBP4	Q07362	185 aa	Known RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	CLP1	Q08685	445 aa	Predicted RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	RPN8	Q08723	338 aa	Known RBP	0.53	□□□□□ -2.32
SEC8	YPR055W	YOR292C	Q08743	309 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	YPR063C	Q12160	140 aa		0.53	□□□□□ -2.32
SEC8	YPR055W	HPR1	P17629	752 aa	Known RBP	0.53	□□□□□ -2.33
SEC8	YPR055W	ITR2	P30606	609 aa		0.53	□□□□□ -2.33
SEC8	YPR055W	CTM1	P38818	585 aa		0.53	□□□□□ -2.33
SEC8	YPR055W	YDR089W	P38966	869 aa		0.53	□□□□□ -2.33
SEC8	YPR055W	AIM20	P40451	204 aa		0.53	□□□□□ -2.33
SEC8	YPR055W	YGL088W	P53151	121 aa		0.53	□□□□□ -2.33
SEC8	YPR055W	RGM1	Q00453	211 aa		0.53	□□□□□ -2.33
SEC8	YPR055W	RDS3	Q06835	107 aa	Predicted RBP	0.53	□□□□□ -2.33
SEC8	YPR055W	IES3	Q12345	250 aa		0.53	□□□□□ -2.33
SEC8	YPR055W	YAL063C-A	Q3E791	96 aa		0.53	□□□□□ -2.33
SEC8	YPR055W	RRP5	Q05022	1729 aa	Known RBP	0.53	□□□□□ -2.33
SEC8	YPR055W	SNT2	P53127	1403 aa		0.52	□□□□□ -2.33
SEC8	YPR055W	POL1	P13382	1468 aa		0.52	□□□□□ -2.33
SEC8	YPR055W	GAL3	P13045	520 aa		0.52	□□□□□ -2.33
SEC8	YPR055W	ICL1	P28240	557 aa	Predicted RBP	0.52	□□□□□ -2.33
SEC8	YPR055W	VMA5	P31412	392 aa	Known RBP	0.52	□□□□□ -2.33
SEC8	YPR055W	UTR5	P32630	166 aa		0.52	□□□□□ -2.33
SEC8	YPR055W	ZRT1	P32804	376 aa		0.52	□□□□□ -2.33
SEC8	YPR055W	GDT1	P38301	280 aa	Predicted RBP	0.52	□□□□□ -2.33
SEC8	YPR055W	ASP1	P38986	381 aa	Predicted RBP	0.52	□□□□□ -2.33
SEC8	YPR055W	FET3	P38993	636 aa		0.52	□□□□□ -2.33
SEC8	YPR055W	EDC2	P40023	145 aa	Predicted RBP	0.52	□□□□□ -2.33
SEC8	YPR055W	FYV8	P46949	817 aa	Known RBP	0.52	□□□□□ -2.33
SEC8	YPR055W	RVB1	Q03940	463 aa	Known RBP	0.52	□□□□□ -2.33
SEC8	YPR055W	SEC13	Q04491	297 aa	Known RBP	0.52	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms